Malus sylvestris (European crab apple): 126607243
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Entry
126607243 CDS
T09027
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126607243
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
126607243
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
126607243
NCBI-ProteinID:
XP_050130727
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Position
16:1287098..1291650
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AA seq
663 aa
AA seq
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MAIDSLVLGAGQEVGKSCVVVTINGKRIMFDCGMHMGYLDHRRYPDFSRIPKSQNESNFD
HSITCIIITHFHLDHVGALPYFTEVCGYQGPIYMTYPTKALSPIMLEDYRKVMVERRGEE
EQFSSHHIAECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDATMVYTGD
YNMTPDRHLGAAQIDRLNLDLLISESTYATTIRDSKYAREREFLRAVHKCVAAGGKVLIP
TFALGRAQELCILLEDYWERMNLKVPIYFSAGLTLQANMYYKMLISWTSQKVKETYSTHN
AFDFKNAHKFDRSMMHAPGPCVLFATPGMISGGFSLEVFKHWAPSAMNLVTLPGYCVAGT
IGHKLMSGKPTKIDLDKDTQIDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEK
PRMAILKGKIQSELGIQCYDPANNETVSVPSTHYAKAVASDTFIQSCSNPNFKFSKRSSE
DEHGLSLGTRNSTPGLQVSDERAAEGVLVMEKSKKTKVVHQEELMLMLGEKKHQVQFAYC
CLVQTGNLKEAKSTSGNDDQLCKSERGSRLLRRLSAKLSNEFSEGNIQDFEDHLEVASFR
ASVCLKENCPHRLLDGHGVRNKSEEAVYFCCSWAMADEKLAWQVISICQNFSMHEQNKGA
STL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgactctctcgtcctcggcgccgggcaagaggtcggtaagagctgcgtggtg
gtgacaatcaatgggaagcgaatcatgttcgactgcggaatgcacatgggctatctcgac
caccgccgctaccccgatttctctcgcattcccaaatcgcagaacgagtcgaacttcgat
cactccattacttgcatcatcatcacccactttcacttagatcacgttggggctcttcct
tacttcaccgaggtctgcggttatcagggtccaatttacatgacgtatccgacaaaggca
ctgtctcctataatgttggaggactatcgaaaagtgatggtggagcgaaggggtgaggaa
gagcagttttcgtctcatcacattgccgagtgcatgaagaaagtaatacctgtggatctg
aagcagacagtgcaggttgataaagaccttcaaatccgtgcatactatgcaggacatgtt
cttggagcggcaatgttttacgcaaaggtgggagacgccactatggtgtacacaggagac
tataatatgacaccagataggcatcttggagcagctcaaattgaccgactaaatttggac
cttcttatttcagaatccacttatgcaacaaccattcgcgattcaaaatatgcccgggaa
agagaatttctcagagctgttcataaatgtgttgctgccggtggaaaagttctaattcca
acttttgctcttggaagagctcaggaactctgtatcttgttggaagattactgggagcgc
atgaatctaaaggttcctatttacttctcagcaggtttgacccttcaagccaatatgtac
tataagatgcttatcagttggaccagtcagaaagtcaaagaaacgtactccacgcataat
gcctttgattttaagaacgctcacaagttcgaccgttcgatgatgcatgctcctggaccc
tgtgttctgtttgccacaccagggatgatcagtggtggcttttcacttgaggttttcaag
cactgggctccttcggcgatgaatcttgttacactgcccgggtattgcgtggctggaacc
atagggcataaattgatgtcgggaaaacccaccaaaattgatctggacaaggacacacaa
attgatgttcgatgccagattcatcagttgtctttcagtcctcacacagacgccaaagga
attatggatcttgtaaaatttctctcccctaagcacgtcatacttgttcatggcgagaag
ccgaggatggcgattctaaaaggaaaaatccagtcggagctgggaattcagtgttacgac
cctgcaaacaatgagaccgtgtcagtcccatcaacccactacgcgaaagcagtagcttcc
gacacgttcatccaaagctgttcgaatccaaacttcaagttctcgaaaagaagttcagaa
gatgaacatggtttgagtttgggaaccagaaattcgactccaggactgcaagtaagcgat
gagagggcagcagaaggggttttggttatggagaaaagcaaaaaaaccaaggtagtacac
caagaggagcttatgcttatgttaggagagaaaaagcaccaagtacaatttgcttattgc
tgccttgttcagactggcaacttgaaagaggccaaaagcacttctggaaacgacgatcag
ctttgcaaatctgagagaggctctcggcttctccgcagattatctgcgaaactttcaaat
gagttttctgaggggaacatccaagactttgaggatcaccttgaagtggcatcgtttcgc
gcatccgtttgcttgaaggaaaactgccctcacagattactggatggccatggcgttcgg
aataaatctgaagaagcagtttatttctgctgcagttgggcaatggcagatgagaagctt
gcatggcaagtcatttcaatctgtcaaaacttctccatgcatgagcaaaacaagggggct
tctaccctgtag
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