KEGG   Malus sylvestris (European crab apple): 126607343
Entry
126607343         CDS       T09027                                 
Name
(RefSeq) autophagy-related protein 18b
  KO
K17908  autophagy-related protein 18
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl04136  Autophagy - other
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04136 Autophagy - other
    126607343
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126607343
   03029 Mitochondrial biogenesis [BR:msyl03029]
    126607343
Membrane trafficking [BR:msyl04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    126607343
Mitochondrial biogenesis [BR:msyl03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    126607343
SSDB
Motif
Pfam: PROPPIN WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_EML_2 Beta-prop_Vps41 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st WD40_CDC20-Fz BCAS3_WD40 WDR54 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 126607343
NCBI-ProteinID: XP_050130850
LinkDB
Position
16:29708712..29714916
AA seq 366 aa
MASPYPIYCASFNQDTSCFAIGTRGGFKIFDSSTGRLCYERAIGAFVIVEMLFSSSLLAI
VGAGEEPSLSPRRLCLFNTTTATALRELNFLTSILAVRMNKKRLVVILQDKTYVYDINSL
AILDTIDTIPNIKGLCAFSPSLEGCFLALPASISKGSVLLYNVMDLHLHCEIDAHRSPLA
AIALSSNGMYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFGPSMQLPDILV
GTSSSGSVHAFSLGFSIYQRSKRSGSFLGSIIPDSVTDALDPAHHDVLHNAAPAGVKSYA
VIRKVDKVADTSTSEIVACRATISIISYNGYFQEYNLSVNSQNEFVWSLEREFKLLAVIT
DDSTSS
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcctctccttacccaatttattgcgcttccttcaaccaagacaccagttgctttgca
atcggcacaaggggcggcttcaaaatattcgattccagtactggcagactctgctatgag
cgagctattggagctttcgttatagtagaaatgctttttagctctagtcttcttgccatt
gttggagctggtgaagagccatccctatcgccccgccgcctctgtttgttcaataccaca
actgcaactgctcttcgagaattaaatttcttaacttccatacttgctgttcgcatgaat
aagaagagacttgttgtcattttacaggacaaaacatacgtatatgacataaatagtctc
gcaatcttggacactattgatactataccaaatataaaagggctttgtgcattctcacca
agtttggaagggtgctttttggctcttcctgctagcatctcgaagggatctgtgttgttg
tacaatgtcatggacctgcatttacattgtgagatagatgcgcatcgatccccacttgct
gcaattgccctttcttccaatggaatgtacatagcaacagcatctgaacagggaaccatt
atcagagtccatctagtctcagaagcaactaagtcgtatagctttcgaagagggacatat
ccatcaactatattttctttgtcatttgggccatctatgcaactgccagatattcttgtg
ggaacaagttcttcaggttctgttcatgccttttctctggggttctccatttatcaaaga
agcaaaagatcagggagttttcttggatcaattatacctgactctgtgactgatgcatta
gatccggcacatcatgatgtacttcataatgctgcaccggcaggagtcaaaagctatgca
gtgatacgaaaggtagataaggttgctgatacatcaacttcagaaattgtggcttgtagg
gcaactatttccatcataagctacaatgggtacttccaggagtacaacttaagtgtcaac
agtcagaatgagttcgtgtggagcttggagcgcgagttcaagctacttgctgtcatcaca
gatgattccaccagctcatga

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