Malus sylvestris (European crab apple): 126607343
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Entry
126607343 CDS
T09027
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
126607343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126607343
03029 Mitochondrial biogenesis [BR:
msyl03029
]
126607343
Membrane trafficking [BR:
msyl04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
126607343
Mitochondrial biogenesis [BR:
msyl03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
126607343
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
BCAS3_WD40
WDR54
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
126607343
NCBI-ProteinID:
XP_050130850
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Position
16:29708712..29714916
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AA seq
366 aa
AA seq
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MASPYPIYCASFNQDTSCFAIGTRGGFKIFDSSTGRLCYERAIGAFVIVEMLFSSSLLAI
VGAGEEPSLSPRRLCLFNTTTATALRELNFLTSILAVRMNKKRLVVILQDKTYVYDINSL
AILDTIDTIPNIKGLCAFSPSLEGCFLALPASISKGSVLLYNVMDLHLHCEIDAHRSPLA
AIALSSNGMYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFGPSMQLPDILV
GTSSSGSVHAFSLGFSIYQRSKRSGSFLGSIIPDSVTDALDPAHHDVLHNAAPAGVKSYA
VIRKVDKVADTSTSEIVACRATISIISYNGYFQEYNLSVNSQNEFVWSLEREFKLLAVIT
DDSTSS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggcctctccttacccaatttattgcgcttccttcaaccaagacaccagttgctttgca
atcggcacaaggggcggcttcaaaatattcgattccagtactggcagactctgctatgag
cgagctattggagctttcgttatagtagaaatgctttttagctctagtcttcttgccatt
gttggagctggtgaagagccatccctatcgccccgccgcctctgtttgttcaataccaca
actgcaactgctcttcgagaattaaatttcttaacttccatacttgctgttcgcatgaat
aagaagagacttgttgtcattttacaggacaaaacatacgtatatgacataaatagtctc
gcaatcttggacactattgatactataccaaatataaaagggctttgtgcattctcacca
agtttggaagggtgctttttggctcttcctgctagcatctcgaagggatctgtgttgttg
tacaatgtcatggacctgcatttacattgtgagatagatgcgcatcgatccccacttgct
gcaattgccctttcttccaatggaatgtacatagcaacagcatctgaacagggaaccatt
atcagagtccatctagtctcagaagcaactaagtcgtatagctttcgaagagggacatat
ccatcaactatattttctttgtcatttgggccatctatgcaactgccagatattcttgtg
ggaacaagttcttcaggttctgttcatgccttttctctggggttctccatttatcaaaga
agcaaaagatcagggagttttcttggatcaattatacctgactctgtgactgatgcatta
gatccggcacatcatgatgtacttcataatgctgcaccggcaggagtcaaaagctatgca
gtgatacgaaaggtagataaggttgctgatacatcaacttcagaaattgtggcttgtagg
gcaactatttccatcataagctacaatgggtacttccaggagtacaacttaagtgtcaac
agtcagaatgagttcgtgtggagcttggagcgcgagttcaagctacttgctgtcatcaca
gatgattccaccagctcatga
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integrated database retrieval system