Malus sylvestris (European crab apple): 126607345
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Entry
126607345 CDS
T09027
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3-like
KO
K03265
peptide chain release factor subunit 1
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126607345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126607345
03012 Translation factors [BR:
msyl03012
]
126607345
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
126607345
Translation factors [BR:
msyl03012
]
Eukaryotic type
Release factors
126607345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
126607345
NCBI-ProteinID:
XP_050130853
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All DBs
Position
16:9605535..9608997
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AA seq
435 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHIEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWESLDINRYVLKNISGEIIVKHFNKEQENNQSNFRDA
ANADLEVQDKMSLLEWFANEYRRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRS
FDEFSDNEEVYDDSE
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcacgagactgataagaacattgagatttggaagattaagaaactgatc
aaggcacttgaagctgcaaggggtaatggaaccagcatgatttctctcatcatgcctccc
cgggatcagatttctcgtgtgactaagatgcttggtgatgaatttggaactgcatcgaac
attaagagcagggtgaatcgtcaatctgttcttggggctattacctctgcgcagcagagg
ctcaagctttacaacaaggttcctcctaatgggcttgtgttgtacacagggaccattgtt
actgacgatgggaaggagaaaaaggttaccattgattttgagcctttcaggcccatcaat
gcatctctttacctctgtgacaacaagttccatattgaagcgctgaatgaactcttagaa
tctgatgacaaatttggcttcattgtcatggatggaaatgggacactttttgggacatta
agtggaaacactagagaggtgcttcataaatttagtgttgaccttccaaagaagcacgga
agaggagggcaatcagctctacgttttgctcgtcttcgaatggagaagcgacacaactat
gttaggaagacagcggagcttgcaacccagttttatattaatcctgccaccagtcagccc
aatgtttcaggattaatactcgctgggtcagctgacttcaaaactgagcttagtcagtca
gatatgtttgatcctcgtctgcaggccaaaatactgaatgtggtggatgtttcttatgga
ggagagaatggtttcaaccaggctattgagttgtcggcagagatcctgtccaatgtgaaa
ttcatacaggagaagaagctgataggaaaatactttgaggagatcagccaggatacagga
aagtatgtttttggtgtggacgacacactaaaagctctagagatgggtgctgttgaaatt
cttattgtgtgggaaagtctcgacatcaatcggtatgtgctgaaaaatatttctggcgag
attatagtgaagcatttcaacaaggagcaggagaacaaccagagcaacttccgggatgct
gccaatgcggacctagaggttcaggacaagatgtcactgctggagtggtttgctaacgag
tacaggcgctttggttgtagtcttgagtttgtcaccaataagtcacaggaggggtcacag
ttctgccgtggttttggtggaattggggggattcttcgctaccagcttgatatgaggtcg
tttgatgagttttctgacaatgaagaagtttatgacgattctgaatag
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