Malus sylvestris (European crab apple): 126607358
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Entry
126607358 CDS
T09027
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 2 isoform X1
KO
K03255
protein TIF31
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msyl03012
]
126607358
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126607358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
TPR_2
CLU_N
TPR_8
TPR_9
TPR_MalT
PAM2
Motif
Other DBs
NCBI-GeneID:
126607358
NCBI-ProteinID:
XP_050130865
LinkDB
All DBs
Position
16:complement(29292569..29314957)
Genome browser
AA seq
1878 aa
AA seq
DB search
MAPKTGKAKPHKPKGDKKKKEEKVLPTVIEISIETPDELQVTLKGISTDTILDVRKLLGV
HVETCHLTNFSLSHEVRGPKLKDSVDILSLKPSHLTIVEGRSIQPLSIASLLYKTSLYFI
KTNDYTEEQAVAHIRRLMDIVACTTSFGSSSAPSPKTPGRSNSKGDVPQHKNDDGPNADA
RAKVLGSISIVDAESSAASTVSMYPPPKLGQFYDFFSLSHLTPPLHYIRRSTRPFLEDKT
EDDLFQMDIRVCSGKPTTIVASSKGFYPAGKRALMVHSLVVLLQQISRPFDVAYNAVMKA
FIEHNKFGNLPYGFRANTWVVPPIVADKPSVFPSLPLEDENWGGNGGGQGRDGKHDYRPW
AKEFAILKVMPCSTSEERQVRDRKAFLLHSLFVDVSVLKAVTAIKRLVETNHCALNDPTF
SLVHEESVGDLIVKVTRSMPDASVKVDCKIDGSQVLGIPQEQVTQRNLLKGITADESATV
HDTATLGVVVVRLCGFTAVVRVSSEVNWEGKPVPKDVEIEDQLEGGANALNVNSLRLLLQ
QSSLPQSSNEVLRTNFEGIHTTRSLVKKVLEDSLLRLQDGPTNNTKSIRWELGACWVQHL
QNQASGKTESKKTEQAKIEPVVKGLGKQGGLLKEIKKKMDVRSNKTDQVKDVVGVNNLDI
HQNSDITTQEELEKRDAEKETIWRKMLPESSYLRLKESETGLHLQSPDELIEMAHKYYVD
TALPKLVADFGSLELSPVDGRTLTDFMHTRGLQLSSLGRVVELADKLPHVRSLCIHEMVV
RAYKHILQAVVAAVDNIADLAASIAACLNILLGTPATENGDVDITYDDALKWKWVESFLL
KRFGWQWKHETVKDLRKFAILRGLSHKVGLELVPRDYDMDNVSPFRKSDIVSMVPVYKHV
ACSSADGRTLLESSKTLLDKGKLEEAVNFGTKALSKLVSVCGPYHRMTAGAYSLLAVVLY
HTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVNRALYL
LHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHEALKCNQRLLGPDHIQTAASYHA
IAIALSLMEAYTLSVQHEQTTLQILQAKLGSEDLRTQDAAAWLEYFESKALEQQEAARNG
TPKPDASISSKGHLSVSDLLDYITPDADMKARDARKARAKVKGKPGKNEAIVSDGYQKDD
ILLPSQLVAENSGDKENQSAPPFAEPKHEKVDTSLLDQSIIFEKKDDAAQDDASDEGWQE
AVPKGRSPMGRKSFLSRRPSLKKLNTNFVHASQLSRYNGKPNSLTSPKTSPIEPAAFPGP
ALPVSKKFVKSASFSPKPSNSSMSVSGGTEKHSNPKSAPSTPASIDQVTKSSSVTNPISV
QSTGKLFSYKEVALAPPGTIVKAVGEQLPKGNVPIVQLSKVGQEKTATDVTGEVILVKDV
EEEEKQKLVGEKVVLALEENGIDVKHTKVQNSVARKSLGVVKHASVGVQVEAEIIELKTT
AYEEGQVENAEVTVSNGEISITSQPANTTQNGQLQTQALDSSTKVCPDSEPSFVLTESTT
HFMEENSSLLEAKVEEDGSPHDFSDGGIVKQGPTDGEKLDEPETKKETTKKLSAAAPPFN
PSLVPVFGSVPVAGSKDHGGILPPPVNIPPMLTISPVRRSPHQSATARVPYGPRLAGGYN
RSGSRASRNKHVFHNGENTGDGNHFSPPRVMNPHAAEFVPGQPWIPNGYPASPSDFLPPP
SGYPMSPNGYPSSRNDIPVTQNVFPTSPIGSEESLTIINAPLGVETNIKGEAKENNDMSS
LEVRCETQKIEEELQKEEYVDNVVSHSNPEEKPFETYTVVGNIDVAKEISSKLVVEENPS
KCWGDYSDNEAEVIQVSS
NT seq
5637 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaagactggcaaggccaagccccataaacccaagggagacaagaagaaaaag
gaggagaaagttttgcctaccgtaatcgagattagcatcgaaacaccagatgagctacaa
gtaactctcaagggcatctctacggacacaatcctggacgtgagaaagctgttgggagtc
cacgtggagacatgtcatttgaccaatttctccttatcacatgaggtgcgaggacccaaa
ctcaaagattcggtcgacatcctctcccttaaaccctcccacctcaccatcgtcgaaggt
aggtccatccaaccgctctccattgctagcctattatacaagacctccctatattttatc
aaaactaatgactacacagaagagcaagccgtggcacacatccggcgactgatggacatc
gtcgcttgcacgacatcttttggttcgtcatccgctccttcacctaaaacgcctggccgg
tcaaactcaaagggcgacgtaccgcagcacaaaaacgacgacgggcccaatgcagatgca
agggccaaagttttgggttcaatttcgatcgttgatgccgagtcatctgctgcctcgact
gtgtcaatgtatcctcctccaaagctcgggcagttctacgatttcttttccttgtctcac
cttacgcctcctctccactacataagaagatctacgcgtccgttccttgaggataagaca
gaagacgacttgtttcaaatggacattcgggtttgtagcgggaagccgacgacaatcgtg
gcttccagtaaaggattctaccctgctggaaaacgagctctaatggttcactctttggtt
gttcttcttcagcaaattagtaggccatttgatgttgcatacaacgctgttatgaaggct
ttcattgagcacaataaatttggaaaccttccctacggttttcgcgcaaacacatgggtt
gtccctccaattgttgctgataaaccgtcagttttcccatcacttcctttggaagacgaa
aactggggaggaaacggaggtggtcagggaagagacggtaaacatgattacaggccatgg
gcaaaggagtttgccattttaaaagtaatgccttgctcaacatcagaggagaggcaagtc
cgagaccgcaaggcttttttgcttcacagtttatttgtggacgtctctgttcttaaagct
gttacagcaattaagcgtctagttgagactaaccattgtgccttaaatgatcccactttt
tcacttgttcacgaggaaagtgttggagatttaatcgttaaggtgaccagaagtatgccc
gatgcaagtgtaaaggtagactgtaaaatcgatggcagccaagttcttggaattccgcaa
gaacaagttactcagagaaacctactcaaaggaataacagctgacgaaagtgcaactgtt
catgatactgctacactgggtgttgtggttgtcagactttgtgggtttacggctgttgtg
agggtttcaagtgaggtgaattgggaaggaaaacctgttcctaaggacgttgaaattgag
gaccagcttgaaggtggtgctaatgctttgaatgttaatagcttgagactgttattgcaa
cagtcctccctgcctcaatcatcaaatgaagttctacgcacaaattttgaaggtatacat
actactagatctctcgtgaagaaagtacttgaagacagtctgttaagattgcaggatgga
cccactaataatactaagtccattagatgggagctaggagcatgttgggtacaacatttg
caaaatcaagcttcgggaaaaactgaatctaaaaaaactgaacaagctaagattgagcca
gttgttaagggtcttggaaagcaaggggggttactaaaggaaattaaaaagaaaatggat
gtcaggagcaacaaaactgaccaggtgaaggatgttgttggggttaacaaccttgatata
catcagaattctgatatcactactcaggaggaattagaaaagcgagatgcagaaaaggaa
actatttggagaaagatgcttcctgaatcgtcatatttgcgcctcaaagaatcagaaact
ggtcttcaccttcagtcacccgatgagttgattgaaatggcacataaatactatgttgac
actgcacttccaaaactggttgcagattttggctcccttgaactttcaccagtcgatgga
aggacattgacagattttatgcatactaggggtttgcaattgtcttccctaggacgtgtg
gttgaacttgcagataagctccctcatgtacgatcactttgtatccatgagatggttgtg
cgagcctataaacacatactccaagcagttgtagcagcagttgataatattgcagacttg
gctgcatcaatagcggcatgtttaaatatattgctaggaacaccagcaactgaaaatggg
gatgtagatattacttatgatgatgcattaaaatggaaatgggtggaaagtttccttttg
aagaggtttgggtggcaatggaaacacgaaactgttaaggatctaaggaagtttgccatt
ctccgtggattgtcccacaaggttggacttgagcttgttcctagggactacgatatggac
aatgtatctccttttcggaaatcagatatagtaagcatggtccctgtatataagcacgtt
gcatgttcatcagcggatgggcgtacactcttagaatcgtccaagactttgttggataaa
ggtaaactggaggaagcggttaattttggcactaaggcactctcaaaactagtgtccgta
tgtgggccttatcatcgaatgacagcaggagcatatagtcttcttgctgtagtattgtac
cacactggggatttcaaccaggcgaccatctatcagcaaaaggcattggatatcaatgag
agggagcttggacttgatcatcctgatacaatgaaaagttatggggatttggctgttttc
tattacagacttcaacatacagagttggccctcaagtacgtcaatcgtgctttgtatctt
ttgcatctaacatgtgggccgtctcatccaaatacggctgccacctatattaacgtggca
atgatggaagaaggtttggggaatgtccatgttgctcttaggtatctccatgaagcgcta
aagtgcaatcaaaggctacttggacctgatcatatacagaccgctgctagctatcatgcc
attgctatagcactctctttgatggaagcttacacattaagtgttcagcacgaacaaact
accttacagatactgcaagcaaaacttggctctgaggatctacgcacacaggatgccgct
gcatggcttgagtatttcgagtctaaggctttggagcagcaagaagctgcacgcaatggt
actccaaagccagatgcctctatctccagcaaaggacatttaagtgtgtcagaccttttg
gattatataacaccagatgctgatatgaaagcaagggatgcaagaaaagctcgtgcaaag
gttaaaggaaaaccaggaaaaaacgaggcaatagtctcagatggataccagaaggatgac
attttgttaccaagtcagcttgttgccgagaattcaggtgataaagagaaccagtctgca
cctccatttgcagaacctaagcatgagaaagttgatacaagtctactggatcaatcaata
atattcgaaaaaaaagatgatgcggcacaagatgatgcctcagatgaaggttggcaagaa
gcagttcctaaaggtcgttcacccatgggtcgcaaatcctttctgtcaaggagaccaagc
ctcaaaaaactgaatactaattttgtgcatgcatcccaattatcacgatacaatggaaag
cctaatagtttgacatctccaaaaacaagcccaattgagcctgctgcttttcctggacct
gctcttcccgtttcaaaaaagtttgttaagagtgcaagcttcagtcctaagccaagcaac
tctagcatgtcagttagtggagggacagagaagcactcaaacccaaagtcagccccttct
actccagcttctattgatcaagttaccaagtcatcttctgtgacaaatccaatcagtgtt
cagtcaactggaaaacttttctcctataaagaagttgcattggctcctcctggaacaatt
gtgaaggcagtgggagagcaattaccaaaaggaaatgttcctattgtacaactttctaag
gttggccaggagaaaactgcaacagatgttactggtgaagtgatactagttaaagatgtc
gaggaagaggaaaagcaaaaacttgtgggagagaaagtggttttggctcttgaggaaaat
ggtattgatgtaaaacatacaaaagtgcagaactctgtggcaaggaaatctctgggagtt
gtaaagcatgctagtgttggagtacaagtggaagctgagatcatagaactgaaaaccact
gcttatgaagaaggacaagtagaaaatgccgaagtcacagtttcaaacggtgagatttct
attacttcccaacccgcaaacactactcaaaatggacaattgcaaactcaagcgctggac
agttcgaccaaggtttgccctgattcagaaccttcatttgttttaactgaaagcacaact
cactttatggaagaaaattcttcccttttggaagcaaaggttgaagaagatggaagtcca
catgatttctctgatggtgggatagttaagcaagggccaactgatggagaaaagttagat
gaaccagaaactaaaaaagagaccaccaagaaactttctgcagccgcaccacctttcaat
ccatccctagtaccagtttttggttcagttccagtggcaggttccaaagatcatggaggg
attttgcccccaccagtaaatattcctcctatgcttacgatcagtcctgttcgtagatca
cctcatcagtcagcaacagcaagggttccgtatggtccacgattggctggtggatataat
agatctggaagtcgggcttcacgtaataaacatgtcttccacaatggtgagaacacaggg
gatggaaatcactttagtccacctagagtaatgaacccacatgcggcagagtttgtacct
ggccaaccttggattcccaatggctatccagcatctcctagtgattttttgcctccccca
agtggttatcccatgtccccaaatggatatccatcgtcgcgtaatgatattccagtgact
caaaatgtgttcccaacatctccaatcggttcagaagagtcattaacaattataaatgct
ccacttggtgttgaaacaaatattaaaggtgaagcaaaagagaataatgacatgtcttca
ttagaagttagatgcgagacgcaaaaaattgaagaagagttgcagaaagaagagtatgtt
gataatgtagtctctcattctaatcctgaagaaaagccttttgaaacatatacagttgtt
ggtaatattgatgtagcaaaagagatcagcagcaaattagttgttgaggaaaatccaagt
aaatgttggggagattatagtgacaatgaagctgaggtcattcaagtttctagttga
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integrated database retrieval system
