Malus sylvestris (European crab apple): 126607429
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Entry
126607429 CDS
T09027
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04141
Protein processing in endoplasmic reticulum
msyl04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126607429
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126607429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
msyl03110
]
126607429
04131 Membrane trafficking [BR:
msyl04131
]
126607429
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
msyl04091
]
126607429
Chaperones and folding catalysts [BR:
msyl03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
126607429
Membrane trafficking [BR:
msyl04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
126607429
Autophagy
ER-phagy
Other ER-phagy associated proteins
126607429
Lectins [BR:
msyl04091
]
L-type lectins
126607429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
SARAF
Motif
Other DBs
NCBI-GeneID:
126607429
NCBI-ProteinID:
XP_050130967
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All DBs
Position
16:9509307..9511994
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AA seq
550 aa
AA seq
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MAGTRWRNFTGLLLLLLVLLIGCSASQIRASSEHEVDSIFYEPFSESFEGRWIVSSKDEY
QGVWKLSKSEGHDDYGLLVSEKARKYAVVKELDKAVSLKDGTVVLQFEVRLQNGLECGGA
YLKYLRPQDAGWKAEEFDNESPYSIMFGPDKCGSTNKVHFIFKHKNPRSGEFVEHHLKDP
PSVPSDKLSHVYTAILKPDNQVRILIDGEEKKNANLLSAKDFEPALIPAKTIPDPEDKKP
EDWDERAKIPDPNAIKPDDWDEDAPMEIEDEDAVKPEGWLDDEPDEIDDPEATRPEDWDD
EEDGVWEPPKADNPKCSLAPGCGEWKKPMKHNPAYKGKWSPPMIDNPSYKGIWKPREIPN
PDYFETEKPDFEPIAAIGIEIWTMEDGILFDNILIADDEKVAESVRLITWKPKFETEKEK
QKAEEEAAGLSDGLSSYQKKVFDLLYKIADVSFLDAYKPKIIDLIEKGEKQPNITIGVIV
SVVVVLLSMFFKLFFGGKKPVVTVPEPNRATAAETPRDEGSSGEKEDENEKEEEEAAPPP
RRRPTTRRET
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaacacggtggcgtaatttcactggcctccttcttcttctgctggtactgctg
attggctgctccgcttctcagatccgcgcttcttccgaacatgaagtcgattcgatcttt
tacgagccgttttctgagtcgtttgaaggccgatggattgtttcttccaaggacgagtac
caaggggtatggaaactgtccaaaagtgagggacatgatgattacgggctgttggtaagt
gagaaggcaaggaagtatgcagtggtgaaagagctcgacaaggctgtgagcctcaaggat
ggaaccgttgtcctgcagtttgaggtccggctccagaatgggctcgaatgtggcggtgct
tacttgaaatacctccgcccccaggatgcgggttggaaagcagaggaatttgacaatgag
tcgccttattccattatgtttggaccggacaaatgtggttccacaaacaaggttcatttc
atcttcaagcacaagaaccccaggagtggagagtttgttgagcaccatctcaaggaccct
ccatccgtgccctccgacaagctgtctcatgtttatactgcgatactgaaacctgataac
caagtgaggattttaattgatggggaggagaagaagaatgcgaatcttctttcggctaaa
gattttgagcctgcgttgattccagccaagacaattcctgaccctgaggataagaagcca
gaggattgggatgagcgggcgaagattccagaccccaatgccattaagcctgatgattgg
gatgaggatgcaccaatggaaattgaagacgaggatgctgtgaaacctgaagggtggttg
gatgatgaacctgatgagattgatgaccctgaggcgacaagaccagaagattgggacgac
gaagaggatggtgtatgggaaccgccgaaggctgataaccccaagtgttcattggcacca
ggttgtggagaatggaagaagccaatgaaacataatcctgcttataaaggaaaatggagc
cctcctatgattgacaaccccagttacaagggcatatggaagcctcgagaaattccaaat
cctgattactttgagaccgagaaacccgactttgagcccattgctgctattggcattgag
atctggacaatggaggatggaatattgtttgacaatattctcatagctgatgatgagaag
gttgctgaatctgttaggctaataacatggaagccgaagtttgagactgaaaaagagaaa
cagaaggctgaggaagaagctgcaggtctttcggatggactctcaagctaccagaagaaa
gtattcgaccttctctacaaaatagcagatgtttcttttttggatgcatacaaacccaag
atcattgatctgattgagaagggagaaaaacagcccaatattacaattggtgttattgtt
tccgttgtggttgttctcttgtcaatgttctttaaactcttctttggtggcaagaaacca
gtggtaactgttcctgagccaaacagggctacggctgcagagactccgcgcgatgaagga
agcagtggcgagaaggaagatgagaatgagaaagaagaagaagaagctgctcctcctccc
cgcaggcggcctaccaccagaagggaaacatga
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