Malus sylvestris (European crab apple): 126607623
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Entry
126607623 CDS
T09027
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00040
Pentose and glucuronate interconversions
msyl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
126607623
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
126607623
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
126607623
NCBI-ProteinID:
XP_050131252
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Position
16:23430098..23434150
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AA seq
446 aa
AA seq
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MAVFDSKKKWVGAFMMVLLIFYFAAAAVSEISRNSNGGRDKLQSSSDSSMAARVAEDDQG
FNKHAVEDPEEIASMVDMSIRNSTERRKLGYFSCGTGNPIDDCWRCDPNWHKNRKRLADC
GIGFGRNAIGGRDGRFYVVTDPNDDDPVNPRAGTLRHAVIQNEPLWIVFKRDMVIQLKQE
LIMNSFKTIDGRGVNVHIANGGCITIQYVTNIIIHGLHIHDCKPTGNALVRSSPTHFGWR
TMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNHMTHHNEVMLLGHSD
SYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSGNPTINSQG
NRYAAPTNPFAKEVTKRVETATTEWKNWNWRSEGDLLLNGAYFTPSGAGASASYARASSL
GAKSSAMVGSITSGSGALPCRRGHPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtttgatagtaagaagaaatgggtcggtgcgttcatgatggtgcttctcata
ttctacttcgctgctgctgcagtgtctgagatctctcgcaacagtaatggaggaagagac
aagttgcagagctcgagcgactcatcaatggcagccagagtggctgaggatgaccaagga
ttcaacaagcatgcagttgaagatccagaagagattgcttccatggttgacatgagtatc
cgaaacagcactgagaggaggaagctgggctacttctcctgtggaactggcaatccaatc
gatgactgctggcgctgtgatcccaactggcacaaaaaccgcaagcgcctcgcagactgt
ggcattggttttggcaggaatgccattggtggtcgcgatggacgcttctatgttgtcacc
gaccctaatgatgatgaccccgttaaccccagggctggcactcttcgccatgctgtcatc
cagaacgagcctctctggattgtgttcaagcgagacatggtgatacagttgaagcaggag
ctcatcatgaacagcttcaagactattgatggacgcggagtcaatgttcacattgctaac
ggaggatgcatcacaatccaatatgttacaaatattatcattcacggtctccacatccac
gactgcaagcccacaggaaatgctttggtgaggagctcgcctacccactttgggtggcgg
acaatggctgatggcgatgctgtctccatcttcgggtcaagccatatttgggttgatcac
aattccctctccaactgcgctgacggtctagttgatgctgtcatgggctcaactgcaatt
accatttccaacaaccacatgacccaccacaatgaggtgatgctgctgggccacagtgat
agctacaccagagacaagcaaatgcaagtcacaattgcttacaaccactttggagaggga
cttatccaaagaatgccaaggtgcaggcacgggtatttccatgttgtgaacaacgactac
actcactgggaaatgtatgccattggtggaagtggaaatcccaccatcaacagccaaggc
aacagatatgctgctccaaccaacccttttgcaaaggaggttaccaagagggttgagacg
gctaccactgaatggaagaactggaactggagatcagaaggagacctgctgctcaatggt
gcctacttcactccatctggagctggagcttcagcaagctacgccagagcctcaagcttg
ggagccaagtcatctgccatggttggatccataacttcaggttccggtgcacttccctgc
cgcagaggccacccctgctag
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