Malus sylvestris (European crab apple): 126607909
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Entry
126607909 CDS
T09027
Name
(RefSeq) DNA repair protein XRCC2 homolog
KO
K10879
DNA-repair protein XRCC2
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126607909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126607909
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
126607909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
Motif
Other DBs
NCBI-GeneID:
126607909
NCBI-ProteinID:
XP_050131573
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All DBs
Position
16:complement(489852..492754)
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AA seq
316 aa
AA seq
DB search
MTPKRWIDGDESAAEMLGRVAAERPFLLIPPLHRVPLRVGNVVELVGPSSSAKTLILIQA
AVNCILPKEWNGVHYGGLERLVMFLDLDCRFDILRLSEMLKLRIMEPNGSMNYDEGLFNL
CMRRFLYVRCYDSLQFLATLKTMHYRLRKEKEEHHVSIYLLMIDSIGSFHWIDRGSTFFP
LGGEKRKCLSLQNVSDSVVQEIRKLQLVHPMLVIATKEIILGNAYGAYEAKQNKSLPEVS
DLRNSTSNTQQLPYREYMPSVWQSFVTHKLLVRASDDHLPIRHHEESSLYLSEWLLPSLS
FRDKFIVKDAGIVMVS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccaaaaggtggatcgatggggacgagagcgctgccgagatgctcggtcgggtt
gcggcggagcgacccttcttgctcattccccctctccaccgcgttccactccgcgttggc
aatgttgtggagctcgtcgggccctcttcttccgccaaaaccctcatcctcattcaagct
gctgtgaactgcattctcccaaaggagtggaatggggtgcactatgggggcttggagcgt
ttggtaatgttccttgacttggattgccgcttcgacattctccgcctttcggagatgcta
aagctccgaattatggaacccaatgggtcaatgaattacgacgagggtttgtttaatttg
tgcatgagacgcttcttgtatgtccgttgctacgatagtcttcagtttcttgccactctc
aagacaatgcattatcggcttcgaaaggagaaagaagagcatcatgttagcatttattta
ctcatgattgacagtattggatctttccattggatagatcgtggctcaacattctttccg
cttgggggcgagaagaggaaatgcctctctcttcagaatgtgtcggattctgtagttcaa
gagatcagaaagcttcagctggtgcatcccatgcttgtgatagctacaaaagaaataatt
ttggggaatgcatatggtgcttatgaggccaaacaaaataaatctttgccagaggtctcg
gatttaagaaattcaacgagtaatactcaacaacttccatatcgcgagtatatgccatcc
gtctggcagtcctttgttacacacaagttacttgtacgagcttcagatgatcatctgccg
ataagacatcatgaagaatcttccctctatttgtctgaatggttgttgccttcacttagt
ttccgagacaagtttatcgtgaaagatgctggtatcgttatggtttcctga
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