Malus sylvestris (European crab apple): 126608065
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Entry
126608065 CDS
T09027
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG5-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126608065
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126608065
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126608065
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
Prok-RING_4
zf-RING_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
126608065
NCBI-ProteinID:
XP_050131783
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All DBs
Position
16:6943149..6946337
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AA seq
457 aa
AA seq
DB search
MGGKSSKDWSERQFSHSGSTASSSWNQHGYSEPHPPQNLYHTVPQHRYTPSPSFNGVSRP
VRVPQQRRSWHKSYSRIADNYCSLDEVTSALAQAGLESSNLIVGIDFTKSNEWTGSMSFK
QKSLHHIGNTQNPYEQAISIIGKTLSVFDEDNLIPCFGFGDASTHDQDVFSFYEDEQHCN
GFEEVLARYRDIVPHLRLAGPTSFAPIIEMAMTVVEQSGGQYHVLLIIADGQVTRSVNTQ
RGHLSSQEQRTVDAIVKASEYPLSIVLVGIGDGPWDMMREFDDNIPARAFDNFQFVNFTE
IMSKNVNLSRKQTEFSLAALMEIPSQYKATLELGILGGRSGNCPNRVPLPPPHNVAVSVG
SNTRQFGSSDSFQQRSTPYAGYNTGGSTPSHTGYARYNAEASKPPYTGYDSQVCPICLTN
PKDMAFGCGHQTCCDCGKDLESCPICRSNIQTRIRLY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaaaaagctcgaaagattggagtgagagacagttttcgcacagcggatcaact
gcttcttcttcatggaaccaacatggctactcagaaccacaccctccacaaaacctgtat
catacagtaccacagcatcggtacactccttcgccatcttttaacggtgtgtctcggcca
gttagagttccccagcaacgacgtagttggcataaaagttactcaaggatagctgataat
tactgttccttggatgaggttacttctgctcttgcacaagctggcctagagtcttctaat
ctgattgttggtattgacttcacaaagagcaatgagtggacaggttcgatgtcatttaaa
caaaaaagcttgcatcacattggaaatactcaaaatccctacgaacaagcgatctcaatt
atcgggaaaacattatccgtctttgatgaagataacctaattccatgctttggattcgga
gatgcatctacacatgatcaagatgtcttcagcttctatgaggatgagcaacactgtaat
ggatttgaggaagtattggcgcgatacagagatatcgttccccatcttcgacttgcagga
cctacttcttttgcccccattattgagatggcgatgactgtcgttgagcaaagcggaggc
cagtaccatgttttactgatcattgccgatgggcaggtgacaagaagtgtcaatacacaa
cgtggtcatctgagctcacaagaacaaaggacagttgatgcaattgtaaaagcaagcgag
tacccattgtctatagtcttggtgggaatcggagatggcccttgggacatgatgagggaa
ttcgacgacaatattcctgctcgagcatttgataattttcagtttgtgaattttacggaa
atcatgtcgaagaatgtgaatctatccagaaagcagacagagttttctcttgcagccttg
atggaaataccttctcaatacaaagcaaccctagagcttggaatattgggaggacgcagt
gggaattgtccaaatagggttccccttcccccaccccacaatgttgcagtctcagtaggc
agcaacacgaggcagttcggctcgagcgatagttttcagcagaggtcgactccttatgct
ggatataatacaggaggtagcacaccttctcatacaggatatgctcgatataatgcagaa
gccagcaaacctccttacacaggatatgatagtcaggtttgccctatttgtcttactaat
ccaaaggacatggcctttggttgtgggcaccagacttgttgtgactgcggaaaggacctt
gaatcgtgcccgatttgccggagcaatatccaaaccagaataagactctactag
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