Malus sylvestris (European crab apple): 126608093
Help
Entry
126608093 CDS
T09027
Name
(RefSeq) LEC14B homolog isoform X1
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126608093
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
126608093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
126608093
NCBI-ProteinID:
XP_050131817
LinkDB
All DBs
Position
16:14320370..14333822
Genome browser
AA seq
475 aa
AA seq
DB search
MSYIARFGKDNGACDTGNSAEGSGSSKGPDEVSNDFDHEIAQLTKHKSRPHQLLRGDMPG
KLRLPVSTMKMLVGRESNHSGRGRFSSADCCHVLSRYLPLNGPWGVDQSRSPAYVSQFSN
DGLFFVAGFQGGHIRIYNVEKGWKVQKDILTQSLRWTITDTSLSPDQRYLVYASMTPVVN
IVNVESSKTESLANVTEIHGGLDFSIDDDEDEFGIFSVKFSTDGRELVAASSDASIYVYY
LQENKVSLRIPAHQSDVNTVCFADESGHLIYSGSDDNLCKVWDRRCLMTKGKAAGVLMGH
LEGVTFIDSRGDGRYLISNGKDQTTKLWDIRKMSSTAIYSPRRTYRDWDYRWMEYPSHAT
TLKHPNDQSLATYRGHAVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAR
LDHHEGPVRDCSWHPLYPILVSSSWDGTVARWEFPGDDQVPTLMRPKLRPRRVFY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagttacatagcgaggtttggtaaagataatggcgcctgtgataccggaaattctgct
gaaggttcgggttcaagtaaaggacctgatgaagtatccaatgattttgatcatgaaatt
gctcaacttaccaagcataaatcaagaccccatcaacttttgcgcggggatatgcctggg
aagttgaggttaccggtttcaacgatgaaaatgctggtcggtcgcgaaagtaatcattca
gggcgggggaggttctcatcggcagattgttgccatgttttgagccggtatctgccccta
aatggtccctggggggtggaccagtccagaagccctgcttatgtttctcaattttccaat
gatggtttgttttttgttgctggatttcagggaggccatattagaatatataatgttgaa
aagggatggaaagttcagaaggatatcctgacccaaagcttgagatggacaattaccgat
acgtctctatcaccggaccaacgttatctagtttatgctagcatgacaccggttgtcaat
attgtgaatgtggaatcttctaagacagagtcacttgcaaacgttacggaaattcatgga
ggtctagatttttctattgatgacgatgaggatgagtttggaattttctcagttaaattt
tcaactgatgggcgagagcttgtagctgcaagtagtgatgcttcaatatatgtttattat
ctacaagaaaataaagttagcctccgaataccagcacaccagtctgatgtaaacactgta
tgctttgctgatgagagcggccatctcatatattctggcagtgacgacaacctctgtaag
gtgtgggatagacgctgcttaatgacgaaaggaaaagcagctggggtcctgatgggacat
cttgaaggtgttacatttattgatagtcggggagatgggcgttacttgatatcaaatggg
aaggaccagactaccaaactctgggatataagaaagatgtcctctacagccatttacagt
ccaaggcgtacatatcgtgactgggattacaggtggatggagtacccatctcatgcaaca
actttgaaacatcccaatgatcaatccttggctacatatagaggccatgcagtcctgcgc
actttaattcgctgttacttttctccagcatatagtaccggacagaagtacatctacact
ggctcaagtgatcattctgtctatatatatgatctggtgactggagctcaagttgcgaga
ctagaccatcatgaaggacctgtaagagactgtagttggcatcctctatatcccattttg
gtcagctcttcttgggatgggaccgttgcccgatgggaatttcctggtgatgaccaagtt
cccaccctgatgaggccaaaattacgcccaaggagagtcttctactga
DBGET
integrated database retrieval system