KEGG   Malus sylvestris (European crab apple): 126608093
Entry
126608093         CDS       T09027                                 
Name
(RefSeq) LEC14B homolog isoform X1
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
msyl  Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:msyl04121]
    126608093
Ubiquitin system [BR:msyl04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     126608093
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_HPS5 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 126608093
NCBI-ProteinID: XP_050131817
LinkDB
Position
16:14320370..14333822
AA seq 475 aa
MSYIARFGKDNGACDTGNSAEGSGSSKGPDEVSNDFDHEIAQLTKHKSRPHQLLRGDMPG
KLRLPVSTMKMLVGRESNHSGRGRFSSADCCHVLSRYLPLNGPWGVDQSRSPAYVSQFSN
DGLFFVAGFQGGHIRIYNVEKGWKVQKDILTQSLRWTITDTSLSPDQRYLVYASMTPVVN
IVNVESSKTESLANVTEIHGGLDFSIDDDEDEFGIFSVKFSTDGRELVAASSDASIYVYY
LQENKVSLRIPAHQSDVNTVCFADESGHLIYSGSDDNLCKVWDRRCLMTKGKAAGVLMGH
LEGVTFIDSRGDGRYLISNGKDQTTKLWDIRKMSSTAIYSPRRTYRDWDYRWMEYPSHAT
TLKHPNDQSLATYRGHAVLRTLIRCYFSPAYSTGQKYIYTGSSDHSVYIYDLVTGAQVAR
LDHHEGPVRDCSWHPLYPILVSSSWDGTVARWEFPGDDQVPTLMRPKLRPRRVFY
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagttacatagcgaggtttggtaaagataatggcgcctgtgataccggaaattctgct
gaaggttcgggttcaagtaaaggacctgatgaagtatccaatgattttgatcatgaaatt
gctcaacttaccaagcataaatcaagaccccatcaacttttgcgcggggatatgcctggg
aagttgaggttaccggtttcaacgatgaaaatgctggtcggtcgcgaaagtaatcattca
gggcgggggaggttctcatcggcagattgttgccatgttttgagccggtatctgccccta
aatggtccctggggggtggaccagtccagaagccctgcttatgtttctcaattttccaat
gatggtttgttttttgttgctggatttcagggaggccatattagaatatataatgttgaa
aagggatggaaagttcagaaggatatcctgacccaaagcttgagatggacaattaccgat
acgtctctatcaccggaccaacgttatctagtttatgctagcatgacaccggttgtcaat
attgtgaatgtggaatcttctaagacagagtcacttgcaaacgttacggaaattcatgga
ggtctagatttttctattgatgacgatgaggatgagtttggaattttctcagttaaattt
tcaactgatgggcgagagcttgtagctgcaagtagtgatgcttcaatatatgtttattat
ctacaagaaaataaagttagcctccgaataccagcacaccagtctgatgtaaacactgta
tgctttgctgatgagagcggccatctcatatattctggcagtgacgacaacctctgtaag
gtgtgggatagacgctgcttaatgacgaaaggaaaagcagctggggtcctgatgggacat
cttgaaggtgttacatttattgatagtcggggagatgggcgttacttgatatcaaatggg
aaggaccagactaccaaactctgggatataagaaagatgtcctctacagccatttacagt
ccaaggcgtacatatcgtgactgggattacaggtggatggagtacccatctcatgcaaca
actttgaaacatcccaatgatcaatccttggctacatatagaggccatgcagtcctgcgc
actttaattcgctgttacttttctccagcatatagtaccggacagaagtacatctacact
ggctcaagtgatcattctgtctatatatatgatctggtgactggagctcaagttgcgaga
ctagaccatcatgaaggacctgtaagagactgtagttggcatcctctatatcccattttg
gtcagctcttcttgggatgggaccgttgcccgatgggaatttcctggtgatgaccaagtt
cccaccctgatgaggccaaaattacgcccaaggagagtcttctactga

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