Malus sylvestris (European crab apple): 126608152
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Entry
126608152 CDS
T09027
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126608152
Enzymes [BR:
msyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126608152
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126608152
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Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
AAA_22
IstB_IS21
AAA_16
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
126608152
NCBI-ProteinID:
XP_050131912
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All DBs
Position
16:complement(5544459..5549289)
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AA seq
1175 aa
AA seq
DB search
MDTLSILTPSDIFTRLLPLSRASHPLPRHPTKTLGFCSPKPPPAHSPTSPRFRVRFQRPS
SAFPAKSQLYDADEEEEEDEYEEEEEDDEDVAADEYDDVTGDMSDGLEQSDDEIESSVAD
AEPSTRPEEFKWQRVEKLCGEVKVFGEEMIDDHELASIYDFRIDKFQRLAIQAFLRGSSV
VVSAPTSSGKTLIAEAAAVATVARRRRLFYTTPLKALSNQKFREFRETFGDDNVGLLTGD
SAVNKDAQVLVMTTEILRNMLYQSVGMASSGDGLFHVDVIVLDEVHYLSDMYRGTVWEEI
VIYCPKKVQLICLSATVANPDELAGWIGQIHGKTELVTSSKRPVPLTWHFSTKTSLLHLL
DKTGKHMNRRLSVDYLQLNASGTKSYKDDGSRRRGSRRRGNEMSYDDSNGNMSRRPLSKN
DINLIHRSQVPQITDTLWQLKTRDMLPAIWFIFSRKGCDAAVQYVQDITLLDDCEKSEVE
LALKRFRIKYPDAIRETAVKGLLHGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETLA
AGINMPARTAIIASLSKRGDTGRVQLSPNELFQMAGRAGRRGIDEKGHVVLVQSPYEGAE
AGCKIVFAGLEPLVSQFTASYGMVLNLLAGAKVTHRSNEPDDTEASLSGRTLEEARKLVE
QSFGNYVGSNVMIAAKEELTRIQKEIETLSSEISDEAIDRRSRKILSGPAYKEIADLQEE
LRAEKRLRTELRRRMESQKMSSLRPLLEEFENGQLPFLCLQYKDSEGVQQSIPAVYLGKV
DTVNSSKLKHLVSVDDSFALNAVACEFEPNVVFEPSYYVALGSDNSWYLFTEKWIKTVYK
TGFPNVALALGDALPREIMSTLLDKTELKWEKLAESELGGFWNMEGSLETWSWSLNVPVL
NSLSEHDELLHKSEAYNEAVERYKDQRNKVSRLKKKISRTQGFREYKKIVDMAKFTEEKI
KRLKSRARRLTNRIEQIEPSGWKEFLQISNVIHETRALDINTHVIFPLGVTAAAIRGENE
LWLAMVLRNKILIGLKPPELAAVCASLVSEGIKVRPWKNNSYIFEPSSKVIDVVSFLDDQ
RSSFLELQEKHGVNKPCYLDTQFSGMVEAWVSGLTWREIMMDCAMDEGDLARLLRRTIDL
LAQIPKLPDIDPLLRSNAKTASNIMDRPPISELAG
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggacactctctccatcctcacaccctccgacatcttcacgcgcctccttcctctcagc
cgcgcttcccatcccctcccccgccaccccaccaaaaccctagggttttgctcccccaaa
ccacctcccgcgcactctccgacctcaccgcgattccgagtcagattccagcgccccagc
tccgccttccccgccaaatctcagctctacgatgcggatgaagaagaggaggaagacgag
tacgaagaggaggaggaggacgacgaggacgttgccgcggatgagtacgacgacgttact
ggggacatgtcggacggactcgagcagagcgacgacgaaattgagagttcggtggctgac
gcagagccgtcgactcggccggaggagttcaagtggcagagagtggagaagctctgcggc
gaagtcaaagtgttcggcgaggaaatgatagatgaccacgagctcgcttctatctacgat
ttccgaatcgataagtttcagagattagcgatacaagcgttcttgagaggttcgtcggtg
gtggtatcggcgccgacgagcagtggaaagactttgatagcggaagctgccgccgtcgca
acggtggctaggcggaggaggttgttctacacgactccacttaaggccttgtccaatcag
aagtttcgggaatttcgtgagacttttggcgatgacaatgtcggccttctcaccggagat
tctgcggtaaataaagatgctcaggttttagttatgaccactgagatcttgcgcaacatg
ttgtatcagagtgtgggaatggcttcttctggggacggactttttcacgtagatgtcatt
gtcttggatgaagttcattatctgagtgacatgtatcggggtacagtgtgggaagaaatc
gttatatattgcccgaaaaaagttcaactcatatgtttgtcagcaacagtagcaaaccca
gatgaattggctggttggattggtcagattcatggtaaaactgaattggtaacttcatca
aagcgtccagtaccattgacttggcatttctcgacaaagacttctttgttgcatcttctt
gacaagacgggaaaacacatgaataggaggttgtcagtcgattatcttcaactcaatgct
tcaggaacaaaatcttacaaagacgatggctctagaaggaggggctcaagaagacgtgga
aatgagatgagttatgatgacagtaatggtaacatgtctagacgaccactgtcaaagaat
gacatcaacttaatacaccgttcgcaagtacctcaaattaccgatacattatggcaactt
aagactcgggatatgcttccagcaatatggtttatttttagtaggaaaggatgtgatgct
gctgttcagtatgttcaagatatcacgctcttggatgactgtgagaagagtgaggttgaa
ttagccttgaagaggttccgcatcaagtatcctgatgctatcagggagactgctgtgaaa
ggtttactgcatggggttgctgcacatcatgctggctgtctacctttatggaaatcattc
atagaagagctgtttcagcgggggcttgttaaggtcgtctttgcaacagaaacacttgct
gcaggaatcaatatgcctgctaggacagccattattgcatccctcagcaaaagaggtgac
actggacgtgtccaattaagtccaaacgaactgtttcaaatggctgggcgtgctggacgt
agaggcattgatgaaaagggtcatgtagtgcttgttcaaagtccttatgaaggcgctgaa
gcaggttgcaagattgtttttgctggacttgaacctttggtctcgcagtttacagcttca
tatggaatggtgctgaatcttcttgctggtgcgaaagttactcatagatcaaatgaacca
gatgacactgaagcctccctatcagggcgaactttggaagaagctagaaagttagtcgag
caaagtttcggaaactatgttggcagcaatgttatgattgccgcaaaagaggagcttact
agaattcaaaaagagattgagacactgtcttcagagattagcgatgaagcaattgataga
aggagtaggaagatattatctggaccagcatataaggagattgcagatctacaagaggaa
ttaagagcagagaaacgactgaggaccgaacttcgaagaagaatggaatctcaaaaaatg
tcttcactacgaccgttgttagaggagtttgaaaacggacaattaccctttttgtgcttg
cagtacaaggattctgaaggagttcaacagtctatcccggctgtttatttggggaaagtt
gacacggtcaacagttcaaagctcaagcacttggtttctgttgatgattcatttgcacta
aatgcagtggcctgtgagtttgaaccaaatgtggttttcgaaccatcatattacgtggct
cttggttcagataattcctggtatttgtttacagaaaagtggattaaaacagtttataag
acgggtttcccaaatgttgctttagcgctaggagatgctttgcctcgggaaattatgagc
acgcttctggataagacggagctgaagtgggagaagcttgccgagtctgaactcggcggt
ttttggaacatggaaggatctcttgagacatggtcttggagtttgaatgttccagtcttg
aatagtctttctgaacatgacgagcttttgcataagtcagaagcatacaatgaagcagta
gaacgttacaaagatcaaagaaacaaggtttcacgtctgaagaagaagatctcgcgtacg
caaggcttcagagaatacaagaaaattgttgacatggccaagtttacggaggaaaagatt
aaaagattaaagagtagagcaaggcgtttgactaatcgaatagagcaaattgagccctcc
ggttggaaggagttcttgcagatcagcaatgtcatacacgagactcgagcattggatatc
aatacccatgtcatatttccacttggtgtaacagcagctgccattcggggagaaaacgaa
ctctggcttgccatggttcttcgaaacaaaatcttaataggtttgaagcccccagaactt
gctgccgtctgcgcaagtttagtatccgaagggatcaaagttcgtccttggaagaacaac
agctacatattcgaaccttcgagtaaagtaatcgacgtggtcagcttcttggatgatcag
agaagctcttttcttgagcttcaagaaaaacatggggtaaataaaccttgctatttggac
acacagttttcaggtatggttgaagcctgggtttctgggttgacttggagggaaatcatg
atggactgcgcgatggacgagggtgatttagcccgcctcctacggcgaaccatcgatctg
ctggcgcaaattcccaagttgccggatattgatccgctactgcggagtaatgcaaagacg
gcgtcaaatattatggaccgtcctccaattagtgagctggctggatga
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integrated database retrieval system
