Malus sylvestris (European crab apple): 126608172
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Entry
126608172 CDS
T09027
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic-like
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126608172
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126608172
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126608172
Enzymes [BR:
msyl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
126608172
Amino acid related enzymes [BR:
msyl01007
]
Aminoacyl-tRNA synthetase
Class II (A)
126608172
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
126608172
Prokaryotic type
Other AARSs
126608172
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Motif
Other DBs
NCBI-GeneID:
126608172
NCBI-ProteinID:
XP_050131947
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Position
16:complement(27313884..27320639)
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AA seq
612 aa
AA seq
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MAGTPEKTAKAVADLTLESEGAMSKNARKKELKNKQREEERRRKEEEKAKQAAAVASSQV
KKDVATEDDEMDPTQYYENRLKYLATQKVDKNPYPHKFSCSITVRECVEKYAGLSDGEHL
EDISVSLAGRIMSKRSSSSKLFFYDLHGGGPDGEKVQVMADLRKSELDESEFSKFHSSVK
RGDIVGITGFPGKTKRGELSIFPRSFIVLSHCLHMMPRQKPGPASDSANVKKTDRWVPGS
PRNPEAYILKDQETRYRQRYLDLILTNEVRQIFKTRFKVIQYIRRFLDNLDFLEVETPMM
NMIAGGAAARPFVTYHNELDMKLFMRIAPELYLKQLVVGGLDRVYEIGKQFRNEGIDLTH
NPEFTTCEFYMAYADYNDLMTLTEEMLSGMVKELTGGYKIQYHSNGLDKDPIEIDFTPPF
RRIDMVEELNKIAGLNINPENLSSAEANQYLKDACKKFDIKCSPPETTTRLLDKLVGHFL
EETCVNPAFIINHPEIMSPLAKWHRSKPGLTERFELFVNKHELANAYTELNDPVVQRQRF
ADQLKDRQSGDDEAMALDETFCRALEYGLPPTGGWGLGVDRLCMWLTDSQNIKEVLLFPA
MKPQDEPSAKAI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcacacccgaaaaaacggcgaaagcggtcgcagatttgacattggaatcggaa
ggagctatgagcaaaaatgcacggaagaaggagttgaagaacaagcaaagggaagaagaa
aggcgccggaaagaggaggagaaggccaagcaggctgctgccgtggcaagctcgcaagtt
aagaaagatgtagcaactgaagatgacgaaatggatccaacgcaatactatgaaaacaga
ctgaagtatcttgctacccagaaggtagataaaaatccatatcctcacaaattctcttgt
tcaatcaccgtgcgcgaatgtgtagagaagtatgcaggcttaagcgatggggagcatctt
gaggatatcagtgtttcattggctgggcgaatcatgagtaaaagatcgtctagctcaaaa
cttttcttttatgacttacatggtggaggacctgatggtgagaaggtccaagtgatggct
gatttaagaaaatcagagctggatgaatctgaattttctaagttccattctagtgttaag
cgtggtgatattgttggtattactgggtttccaggaaagactaagaggggggagttgagc
attttcccaagatcatttatagtgttatcacattgtcttcatatgatgccaaggcagaaa
cctggtcctgcttctgatagtgctaatgtgaagaaaactgatcgatgggtcccaggaagt
cccaggaatcctgaagcatacattttaaaagaccaggaaactcgctatcgtcaacgttat
ttggatctaatattgactaatgaggttcgacaaatattcaagaccagatttaaggtcatt
caatatattagaaggttcctggacaatctggacttcttagaggtcgaaactcctatgatg
aatatgattgctggtggagcggctgcccgtccttttgtgacttatcacaatgaacttgac
atgaagcttttcatgcgcattgcacctgaactctatcttaaacagctagttgttggtggc
ctggatcgtgtttatgagattggaaaacaatttagaaatgagggcattgatttgactcat
aatcctgagttcactacctgtgaattctatatggcttatgcagactacaatgacttgatg
acactgactgaggaaatgttgagtgggatggtcaaggaactaactggtggatataaaatc
cagtatcattcgaatgggctcgacaaagatccaattgagattgactttactcctcctttc
agaaggatcgacatggttgaggaattaaataagattgcaggtctcaacataaatccagag
aatctctccagtgcagaagctaaccaatatcttaaggatgcgtgcaagaaatttgatatc
aaatgttcccctcctgaaacaacaactcgtttgttggacaagcttgtggggcactttttg
gaagagacgtgtgtaaatcccgcgttcatcattaaccatcctgagataatgagtccttta
gcaaagtggcatcgatcgaaacctgggctgactgaacgttttgaattgtttgtcaacaag
catgaacttgccaatgcatacacagaattgaatgatcctgtggtacaacgccaacgattt
gctgatcaactcaaggaccgacaatcaggtgatgatgaagcaatggctctggacgaaaca
ttttgcagagctcttgagtatgggttacctccaactggtggttggggtttgggcgttgac
cggctctgtatgtggttaactgattcacagaatattaaggaagttctactcttcccggct
atgaaaccacaggatgagccttctgctaaagccatttag
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