Malus sylvestris (European crab apple): 126608189
Help
Entry
126608189 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126608189
KO
K12857
Prp8 binding protein
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126608189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
msyl03041
]
126608189
Spliceosome [BR:
msyl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
126608189
Complex C
U5 SnRNP specific factors
126608189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_SPT8
NBCH_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_DCAF12
Nbas_N
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
126608189
NCBI-ProteinID:
XP_050131977
LinkDB
All DBs
Position
16:25197621..25204217
Genome browser
AA seq
344 aa
AA seq
DB search
MMHFAPSEGENALSVVGPRPMDLSTYNGRPAPGPNGKQRTSSLESPIMLLTGHQSAVYTM
KFNPAGTVIASGSHDKEIFVWNVHGECKNFMVLKGHKNAVLDLHWTTDGSQIISASPDKT
VGAWDVETGKRIKKMAEHSSFVNSCHPARRGPPLIVSGSDDGTAKLWDMRLRGAIQTFPD
KYQITAVSFSDASDKIFTGGIDNDIKVWDLRKVEVMMTLQGHQDMITGMSLSPDGSYLLT
NGMDSKLCIWDMRPYAPQNRCVKIMEGHQHNFEKNLLKCGWSPDGSKVTAGSSDRMVYVW
DTTSRRILYMLPGHSGSVNESVFHPNEPIIGSCSSDKQIYLGEI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattttgctcctagtgagggtgaaaatgctttgtcggtagttggtccaaggcca
atggatttgtctacatacaatggtcgcccagcacctggaccaaatgggaaacaaaggact
tccagcttggaatcaccgatcatgttgctgacaggccatcagagtgctgtatacacaatg
aaatttaaccctgctggaacagttattgcgtctgggtcccatgacaaagaaatctttgta
tggaatgttcatggggaatgcaagaactttatggttttgaaggggcacaagaatgctgta
ttggatcttcactggacaactgatggttcacagattatatcagccagtccagacaaaact
gtgggggcatgggatgttgaaacaggaaaaaggataaagaagatggctgagcactcttcg
tttgtgaattcttgccatcctgctcgaaggggacctcctcttattgtcagtggatctgat
gatggaactgccaaactctgggatatgcgtctgaggggagcgatccaaacattccctgat
aaatatcaaattacagctgtcagcttctctgatgcatccgataaaatctttacgggaggt
attgacaatgacattaaggtatgggatttgcgcaaagttgaagtaatgatgacacttcaa
ggccatcaagatatgataacaggtatgtcattgagtcctgatggctcttatcttctgact
aatggaatggacagcaaactctgcatttgggatatgcgcccatatgcaccgcaaaatcgc
tgtgtgaagataatggaaggtcaccagcacaattttgaaaagaacctgttgaaatgtggc
tggtcccctgatggaagcaaggtcacggctggcagttctgatcggatggtctacgtatgg
gacaccacttcccgacgcatcttgtatatgctgcctggccacagtggatccgtcaacgag
tctgttttccatcccaacgaacccatcattggatcgtgcagtagtgataaacagatctat
ctaggggaaatctga
DBGET
integrated database retrieval system
