Malus sylvestris (European crab apple): 126608236
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Entry
126608236 CDS
T09027
Name
(RefSeq) phospholipase D zeta 1-like isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00564
Glycerophospholipid metabolism
msyl00565
Ether lipid metabolism
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
126608236
00565 Ether lipid metabolism
126608236
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126608236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126608236
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
126608236
Membrane trafficking [BR:
msyl04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
126608236
Endosome - Golgi transport
Others
Others
126608236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PH
SAM_1
Motif
Other DBs
NCBI-GeneID:
126608236
NCBI-ProteinID:
XP_050132045
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All DBs
Position
16:complement(12349709..12357872)
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AA seq
1108 aa
AA seq
DB search
MESDQLISGGGSRYLQMRSESAVSPSSFLCRLSSFEPARIFDELPSATIVSVSRPDAGDI
SPVLLSYTIEFQYKQFKWRLVKKPSHVFYLHFALKKRAFFEEIQEKQEQVREWLQNLGIG
DHTDVVHDHEDDETVPLQHDESAKNRDVPSSAALPIIRPALGRDQSIAERSKVAMQGYLN
HFLGNMDIVNSREVCKFLEVSMLSFSPEYGPKLKEDYVMVKHLPKILKDDSTRKCCACGW
FNCCNDNWQKVWAVLKPGFLALLAHPFDTQPLDIIVFDVLPVSDGNGDGQVSLAKEIKER
NPLRHAFKVACGNRSINLRVKSGAKVKDWVASINDAGLRPPEGWCHPHRFGSFAPPRGLT
EDGSQVQWFIDGQSAFEAIASAIEDAKSEIFICGWWLCPELYLRRPFHAHASSRLDSLLE
AKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVYLWSHHEK
LVIVDYQICFLGGLDLCFGRYDTAEHKVGDCPPSIWPGKDYYNPRESEPNSWEDTMKDEL
DRGKYPRMPWHDVHCALWGPPCRDVARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPH
YMGRSQEMEIESKNANNHKEHKRTDSLSSISSCQDIPLLIPQEADGLDCPNEDTKLNVTD
SPHDLLDQPSRVSNNLAFPFRKLKIAPVGPDTPMRGFVDDLDSLARHGKMASDGVAQPGM
KDPEWWETQERGNKGGFTDESGQVGPCCSCRCQVIRSVSQWSAGTSQVEESIHNAYCSLI
DKSEHFIYIENQFFISGLSGDEIIRNRVLEALFRRIMRAYNDKKPFRVIIVIPLIPGFQG
GMDDAGAASVRAVMHWQYRTICRGQNSILHNLNEILGPKMHDYISFYGLRSYGKLFEGGP
VACSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGLLIEDKEMINSVMGGKPWK
AGKFSLSLRLSLWSEHLGIRATEMSQIIDPIVDSTYKDIWMATAKTNTAIYQDVFYCIPN
DFIQSRAAFRQSIAFWKERIGHTTIDLGIAPDQIESFQNGDVKRANPMERLESVKGHLVS
FPLDFMLKEDLRPVFNESEYYASPQVFH
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggaatcggaccagttaatctcgggcggcgggtcccgctacctccaaatgcgatcggag
tcggccgtgtcgccttcctcctttctctgccgtctttcgtccttcgagcccgctcggatt
ttcgatgagttgccgagcgccaccatcgtctccgtctcccgtcccgacgccggcgatatt
agccccgtgcttctctcttacaccatcgagttccaatacaagcagtttaagtggcgatta
gtgaagaaaccgtcacatgtattctacttgcatttcgcattgaagaaacgtgcatttttc
gaggaaattcaggagaagcaagaacaggttagagaatggcttcaaaatctaggaatagga
gatcacacagatgtggtgcatgatcatgaggatgatgagactgttcccctgcagcacgat
gaaagtgctaaaaacagagatgttccatctagcgccgctcttccaatcatccggccagcg
ctgggtagggatcaatccattgcggagagatcaaaggttgcaatgcaagggtatctaaat
cactttcttggaaacatggacattgtgaactctcgagaggtctgcaagttcttggaggtc
tcgatgttatcattttctccagaatatggccctaagctaaaagaagactatgtgatggtg
aagcatcttccgaaaattcttaaggatgatagtaccaggaaatgttgtgcatgtggttgg
tttaattgctgtaatgacaattggcaaaaggtttgggctgtattaaaaccaggattcttg
gccttgctggcgcatccttttgatacccaacctttagatataatagtatttgatgtacta
ccagtctcagatggaaatggggatggccaggtatcactggcaaaagaaataaaagagcgg
aatcctttacgtcatgcatttaaggtggcttgtggaaaccggagcattaatttgagagtt
aagagtggtgccaaagtaaaagattgggttgcctcaatcaatgatgctggactcaggcct
ccagagggctggtgtcatcctcaccgctttggctcttttgcacctccgagaggtttgact
gaagatggtagtcaggttcaatggtttatagatggtcagtcagcatttgaagctattgcg
tcggcaattgaggatgcaaaatcagagatatttatttgtggctggtggctgtgtccagaa
ctgtacctgcggcgtccatttcatgctcatgcttcttctagacttgattctttgctggaa
gcaaaagctaaggaaggggttcagatatacattcttctctataaagaggtagctcttgct
ctgaaaatcaacagtgtttatagcaagagaaaactacttgggattcatgagaatgtgaga
gtactacgttatcctgaccacttttcaagtggtgtttacttatggtcgcaccatgaaaaa
cttgtcattgttgattatcagatttgctttcttggaggtctggatttatgctttggtcgt
tacgatactgctgagcataaagtgggtgattgtcctccttcgatatggcctggaaaggac
tattacaacccgagggaatctgaaccaaattcatgggaggatacaatgaaagatgagttg
gatcgtggaaaatatcctcgtatgccctggcatgatgttcactgtgccctttggggacca
ccttgccgagacgtggctagacattttgttcagcgctggaactatgcaaagagaaataag
gctccaaacgaacaagcaattccactacttatgccgcagcaccacatggtcattcctcat
tacatgggaagaagccaagagatggagattgaaagtaagaacgctaataatcacaaagag
cataaaaggacagattccttgtcgtcgatatcatcctgtcaagatattccgcttcttata
ccccaagaagctgatgggctggattgtccaaatgaagacacaaaactaaatgtgacagac
tctcctcatgatctccttgatcagccaagcagggttagcaacaatcttgctttccctttc
cggaagttaaaaattgcaccagtaggtcctgatacgcccatgagaggctttgtagatgac
cttgattctctggctcgacatggaaaaatggcttctgacggggtggcacagcctggcatg
aaggatccagagtggtgggaaacacaagaaaggggcaacaagggtggtttcacagatgaa
tcgggacaagttggcccttgttgctcatgtcgatgccaggttattagaagtgtcagtcag
tggtcagcaggaacaagccaagttgaagagagcattcacaatgcttattgctcactgata
gataagtccgaacacttcatttacattgagaatcaattttttatatcaggtctttcagga
gatgaaattatacggaatcgtgttttagaagctttatttcgacgtattatgcgagcatac
aatgataagaagccttttagagttataattgtcattccgctcatacccggcttccaggga
ggtatggatgatgctggtgcagcatctgtgagagctgttatgcattggcaatatcgaacc
atttgcagaggacagaattcaatattgcacaatcttaatgaaattcttggtccaaagatg
catgattacatttccttctatggccttagatcttatggtaaactctttgaaggcggtcct
gtggcctgtagtcaggtctatgtgcatagtaaaatcatgattgtcgatgattgcacaact
ttaattggatcagctaacatcaatgataggagtttgcttggttcaagagactctgagatt
ggtctacttattgaagataaagagatgattaattcagttatgggaggaaagccatggaag
gctggaaagttttcattgagtcttcgcttgtcactgtggtctgaacaccttggtattcgt
gctacagagatgagtcaaataatcgacccaattgttgattcaacttacaaggacatctgg
atggcaactgcaaagacaaataccgcaatctaccaagatgtgttttattgcataccaaac
gattttatacagtccagagctgcattcaggcaaagcatagccttctggaaggagagaatt
ggacacacaactatcgacttgggaattgctcctgaccagatagaatcatttcaaaatgga
gatgtgaagagagcgaatcccatggagaggttagagtctgtgaagggccatcttgtttct
ttccctttggatttcatgttgaaagaagatctgagacctgttttcaacgagagcgagtat
tacgcgtctcctcaagtttttcattga
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integrated database retrieval system
