Malus sylvestris (European crab apple): 126608609
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Entry
126608609 CDS
T09027
Name
(RefSeq) protein argonaute 10 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126608609
03036 Chromosome and associated proteins [BR:
msyl03036
]
126608609
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
126608609
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
126608609
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
126608609
microRNA pathway
RISC loading complex
126608609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
E1_UFD
Motif
Other DBs
NCBI-GeneID:
126608609
NCBI-ProteinID:
XP_050132521
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All DBs
Position
16:complement(17368115..17376418)
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AA seq
987 aa
AA seq
DB search
MPIRKKESSEQHLVIKPHLQNPVNPVQKAPKTAQNGKGPPPQESQKAKPHNQTSPPTKNR
GRRRGRGGRKSDQGDVCMRPSSRHCTVAHLPASPSLGGAASVANAPNGYGGNLVSMDMGF
PTSSKSLSFAPRPGYGQVGIKCVVKANHFFAELPEKDLNHYDVRITPEVASTAVNRAIMA
ELVRLYKESDLGMRLPAYDGRKSLYTAGELPFAWKEFNIKLVEEQDGIVGRTRERVYNVV
IKFVARANMHHLGQFLAGKCADAPQEALQILDIVLRELSNKRYCPIGRSFFSPDIRTPQR
LGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLLGKDVLSRTLSDAD
RVKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENLTMKSVIEYFQEMYG
FTIQHGHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDREN
DILQTVQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKNCLPQVGQWN
MMNKKMINGMTVSRWACINFSRGVQESVARGFCSELAQMCQVSGMEFNPEPVIPIHNARP
EQVEKALKHVYHASMNKTKGKDLELLLAILPDNNGSLYGDIKRICETDLGLISQCCLTKY
VFKISKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSS
PSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLVSFR
KATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTR
LFANNHRDRSSVDKSGNILPGTVVDTKICHPTEHDFYLCSHAGIQGTSRPAHYHVLWDEN
NFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYLEPDMQENGSTGHTAK
GTRATGESGVRPLPALKENVKRVMFYC
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atgcctataagaaagaaagagagctcggagcaacaccttgtgatcaaaccccacttgcag
aacccagtgaacccagttcagaaggcaccgaaaactgcccaaaatggcaaaggtccacca
ccccaggaatcccaaaaagccaaaccccataaccaaacttcacccccaacaaaaaacaga
ggaagaagaaggggcagaggtggtcggaagtctgatcaaggcgatgtttgtatgaggcct
agttcgcggcactgcacggtggctcatctgcctgcctcaccaagcttgggtggtgctgct
tctgtagcgaatgctccaaatgggtatggcggcaacttagtttccatggatatggggttt
ccgacttcaagcaagtcattgagctttgctcctcggcctggttatggacaagttgggatc
aagtgtgttgtgaaggccaaccatttctttgcagagttaccagagaaggacttgaaccat
tatgatgttagaataactcccgaagttgcatcgacagctgtgaacagagctatcatggca
gaactggtgaggttgtacaaggaatctgacttaggaatgagactgcctgcttatgatggt
aggaagagtctgtacactgctggtgagctgccctttgcttggaaggagttcaatattaag
cttgttgaggaacaggatggaatcgttggccgaacaagagaaagagtatataatgtggtg
attaaatttgttgcacgagcaaacatgcatcatctgggtcagtttctggccggtaagtgt
gctgatgctccacaagaagccctccaaattcttgacattgtattacgagagctctcgaac
aagaggtactgccccatcgggagatcattcttttcacctgatatcagaacaccacaacgg
cttggtgaagggttggaatcatggtgcggcttttatcagagtataagacctacccaaatg
ggtctttccctcaatattgatatggcttcagctgcatttattgagcctctccctgtaata
gagtttgtagcgcagcttctaggcaaagatgtattgtctaggacattgtctgatgctgac
cgtgtaaagattaaaaaggctcttagaggtgtgaaagttgaagttacacacagagggagt
gttcgtagaaagtatcgagtttcaggattgacatctcaacctacaagagaactagtgttt
cctgttgatgaaaacttgaccatgaagtccgtaattgaatacttccaggagatgtatggg
ttcaccattcaacacgggcatcttccttgccttcaagttggtaaccagaagaaggcaaac
tatttacccatggaggcctgcaaaattgttgaggggcaacggtatacaaaaaggttgaat
gagaagcaaattactgctctcttaaaggttacatgtcaaagacctagggatcgtgaaaat
gacatcctacagactgttcaacacaatgcttatgaccaagatccttacgcgaaggagttt
ggaatcaaaatcagtgaaaaactagcttcggtcgaagctcgaattcttcctgcgccttgg
ctgaagtatcatgaaactggaaaagaaaagaattgtttgcctcaagttggtcagtggaat
atgatgaacaagaagatgattaatggaatgaccgtcagccggtgggcttgtattaatttt
tcacggggtgtgcaagagagtgttgcacgtgggttttgcagtgaacttgctcaaatgtgt
caagtatctggcatggaatttaatccagaacctgtaattccaatccacaatgctaggcct
gagcaagtagagaaagctttgaagcatgtttatcatgcatccatgaacaagaccaaagga
aaagatttagagctcttgttagccattttgcctgacaacaacgggtccctgtatggtgat
atcaagcgaatatgtgaaacagatctcggtttaatatcacaatgctgtctcacaaagtat
gttttcaagatcagcaaacagtacttggctaatgtctccctaaagataaatgttaagatg
ggtggcagaaacactgttcttttggatgctatcagctgcaggatacctttggtcagtgat
attccaaccataatcttcggagctgatgtgactcaccctgaaaatggagaagattccagt
ccctcaattgctgctgtcgtagcttcccaggactggcccgaagtgaccaagtatgctgga
ttagtttgtgctcaagctcacagacaagaactcatacaagatttgtataaaacatggcaa
gaccctgttcgtggcacggtcagtggcggcatgatccgggatcttctggtttcctttagg
aaagcaacaggacagaagccactaaggattatattttacagggatggcgtaagtgaaggt
caattttatcaagtcttactatacgagctcgatgcaatccggaaggcatgcgcttctctg
gaaccaaactatcaaccaccagtgactttcattgtagttcaaaaacggcatcacacacga
ttatttgctaataaccatagggacaggagcagcgtagacaagagtgggaacatattacct
ggcaccgtggttgatactaagatttgtcatccaaccgaacatgatttttatctctgcagt
catgctggtattcaggggacaagtcgcccagctcactaccatgttctctgggatgagaat
aactttactgctgatggaatccagtcattgacaaacaacctttgttacacatatgcaagg
tgcacgcgctctgtctctgttgtacctccggcatattatgcacatttggctgctttccgt
gctcgattctatctggagccagatatgcaagagaatggttctactggtcacactgctaag
ggtacacgcgctactggagagtctggagtccgaccattaccagccttgaaggagaatgta
aagagagtaatgttttattgttag
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