Malus sylvestris (European crab apple): 126609405
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Entry
126609405 CDS
T09027
Name
(RefSeq) F-box/LRR-repeat protein 4-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126609405
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
126609405
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box_5
F-box-like
F-box
LRR_At1g61320_AtMIF1
LRR_RPS2
Motif
Other DBs
NCBI-GeneID:
126609405
NCBI-ProteinID:
XP_050133299
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Position
16:complement(14658087..14662957)
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AA seq
604 aa
AA seq
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MRGNDRINACLPDELIVEVFRLLDSKPSRDACSLVCKRWLSLERLSRTTLRICATGSPDF
VVDLLARRFRNVRTVHIDERLSISFPTPPGRRRATDIAAVSSVRLHSANGSDDGVLDSNS
LSDAGMTAIGDGFPKLEKLSLIWCSSVSSIGLTSLADKCKLLKSLDLQGCYVGDQGLAAV
GKCCKQLEDLNLRFCEGLTDVCVVELALGVGNSLKSLGIAACAKITDAAMEAVGVHCKSL
ENLSLDAEFIHNKGVVSVAQGCPALKSLKLQCINVTDEALTAVGTSCLSLEVLALYSFQK
FTDKGLRAIGKGCKKLKNLIVSDCFFLGDNALESIATGCKELTHLEVNGCHNIGTLGLES
IGKSCPRLTELALLYCQRIGNFALSEVGRGCRFLQSLRLEDCSSIGDEDICNIAKGCRNL
KKLHISRCFEIGNKGVVAVGDYCRSLTDLSLQFCYRVGDQALIAVAQCSSLQYLNVSGCH
QIGDAGLIAIARSCPQISYLDVSILQNLGDMAMAELGEGCPNLKDIVLSHCRQVTDVGIN
HLVKNCTMLTSCHMVYCPGITSDGVAMVVSSCPYIKKVLVEKCKVSPRTKRRAASVISYL
CVDL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggcaacgatcggatcaacgcgtgtctccccgacgagctgatcgtcgaggtcttc
cggctgctcgactccaagcccagccgcgacgcctgctctctcgtctgcaagcgctggctc
tccctcgagcgcctcagccgcacaaccctccgcatctgcgccaccggcagccccgacttt
gtcgtcgacctcctcgcccgccgcttccgcaacgtccgcaccgttcacattgacgaacgc
ctcagcatttcgttccctactccccccgggaggaggcgcgcgactgacattgcggcggtt
tcgtcggtgaggctgcattctgccaatgggtccgatgacggcgtgcttgattcgaacagc
ttatcggacgctggtatgactgctatcggcgacggattccccaagctcgaaaagttgagc
ttaatctggtgctccagtgtctccagtatcgggctaacttcgctcgctgataagtgtaaa
ttgttgaaatcattggatttgcagggttgctatgttggagatcagggactagctgccgtg
ggaaagtgttgcaagcagcttgaagatttgaatttgcggttttgtgagggattgactgac
gtatgtgtggttgaattagcccttggtgttgggaattcattaaagtctcttggtatcgct
gcctgtgcaaagataactgatgctgcaatggaagcagtgggggtacactgcaagtctctt
gaaaacttatcgttggatgcagagttcatacacaacaaaggggtggtttctgtggcccaa
ggatgtcctgctttgaaatctttgaaactacaatgtattaatgtcacagatgaggctttg
actgctgttggaacttcttgtttgtcgctggaggtgttggctctatatagcttccagaaa
tttactgataaaggtttacgggctattggaaaaggatgtaagaagttaaaaaatcttatt
gttagtgactgtttctttctgggtgacaatgctttggaatcaattgcaactggctgcaag
gaacttacacatcttgaagtgaatggttgtcacaatattggaacattgggtctggaatcc
attggaaaatcttgcccgcgtcttactgagttagcattattgtattgccaaaggataggc
aactttgcacttagtgaggttggacgaggctgtcggttcctgcaatctcttcgtctggaa
gattgctcaagtattggagacgaagacatttgcaatatagctaaaggctgtagaaatttg
aagaaacttcacattagtcgatgttttgagattggaaacaagggagttgtagcagttgga
gactattgtaggtcactaacagaccttagcctccagttttgttatagagttggggaccag
gcccttattgctgttgctcagtgtagctccctacaatatctgaatgtcagtggatgccac
caaattggtgatgctggattgatagccattgcaagaagttgcccgcaaattagttatcta
gatgtgagcattcttcagaatttgggggacatggcaatggctgaactcggagaaggctgt
ccaaacctgaaggacattgtactgtcacattgccgtcaagtaacagatgttggtataaac
catcttgttaaaaattgcacaatgcttacatcctgccacatggtttattgcccgggcata
acttctgacggagtagccatggtggtctcgagttgcccctacataaagaaggtcttggtt
gagaagtgtaaggttagcccaagaaccaaacggagggcagcctctgtcatttcctatctt
tgcgtggatctataa
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