Malus sylvestris (European crab apple): 126609597
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Entry
126609597 CDS
T09027
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03250
Viral life cycle - HIV-1
msyl03272
Virion - Hepatitis viruses
msyl04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126609597
03272 Virion - Hepatitis viruses
126609597
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126609597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126609597
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
msyl04147
]
126609597
Membrane trafficking [BR:
msyl04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
126609597
Exosome [BR:
msyl04147
]
Exosomal proteins
Proteins found in most exosomes
126609597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
McpB_HAMP_1st
Motif
Other DBs
NCBI-GeneID:
126609597
NCBI-ProteinID:
XP_050133411
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Position
2:32925576..32927315
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AA seq
419 aa
AA seq
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MVPPAGPNPPNPQLIQQFLSSVLSQRGPSALPYSEDTKWLIRTHLVSITSAYPSLEPKTA
TFTHNDGRSVNLLQADGTIPMSYEGVTYNIPVVIWLMDSYPRHPPCVYVNPTRDMVIKRA
HAHVNPSGLVTVPYLQNWVYPSSNLVELVKNLSAVFGQDPPLFSQRRPNPSPNPNPNPNV
GHSTSSVSNSGYSSYSGYSGSSGSVNHARPAIPPRTYPLSPYGSGGSFSRVQADDPNDVF
KRNAINKLVEMVHGDMAGLRKTREAEIEGLFNAQAVLRQRSEQLDKGLKEMVDEKEGLEQ
QLQMVLMNSDVLEAWSRENEGKTRGSLDGDVDDAFECIDPLSKQLLDCTASDLAIEDVVY
SLDKALQDGSIAIEDYLKNVRSLSRKQFYHRATAAKVRAVQMQSQVANMASRLSHYVSS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggttccaccggcgggtccaaacccaccgaacccccaactgattcagcagttcctgagc
tccgtcctctcccagcgcggcccctccgccctcccttactccgaagacaccaagtggctc
atccgcacccacctcgtctctatcacctccgcctatccttccctcgaacccaaaacggcg
accttcacccacaacgacggtcgctccgtcaacctcctccaggccgacggcaccatcccc
atgtcgtatgagggcgtcacctacaacatccccgtcgtcatctggctcatggattcctac
cctcgccacccgccctgcgtctacgtcaaccccacgcgcgacatggtcatcaagcgcgct
cacgcccacgtcaacccttccggtttggtcaccgtcccctacttgcagaactgggtctac
ccaagctccaacctcgtcgagctcgtcaagaatctcagcgccgttttcggccaggacccg
ccgctcttctcccagcgcaggcctaatcccagtccaaaccctaatcctaatcccaacgtt
ggccattccacgtcatctgtgtcgaattcgggttattcgagctactcgggctattctgga
tcttccggttcggttaatcatgcccgtccggcgatcccgccgaggacgtatccgctttcg
ccttatggaagtggcggatcgttttctcgggttcaggctgatgatccgaacgatgttttc
aagcggaatgcgatcaataagcttgtggagatggtgcacggcgacatggcagggttgagg
aagacgagggaggcggaaattgaaggcctgttcaatgcacaggcggtgctgcggcagcga
tccgagcagctcgacaaagggttgaaggagatggtggatgagaaggagggtttggagcag
cagttgcagatggtgcttatgaattcggatgttttggaggcctggtcgagagagaatgag
gggaagactagggggagcttggatggtgatgtggacgatgctttcgaatgcattgaccca
ctttcgaagcaattgttggattgtaccgcctctgatttggcgattgaagatgttgtgtat
tctttggataaggcattgcaggatgggtcaatagccattgaggattacttgaagaatgtg
aggtcattgtcccgcaagcagttctatcatcgcgctacagctgctaaagtcagggcagtg
caaatgcagtctcaggttgcgaatatggcttctcggctttcgcattatgtttcatcttag
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