Malus sylvestris (European crab apple): 126609614
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Entry
126609614 CDS
T09027
Name
(RefSeq) rab escort protein 1-like
KO
K23460
Rab proteins geranylgeranyltransferase component A
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
msyl01006
]
126609614
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126609614
Prenyltransferases [BR:
msyl01006
]
Protein prenylation
Rab geranylgeranyltransferase
126609614
Membrane trafficking [BR:
msyl04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
126609614
Endosome - Lysosome transport
Rab GTPases and associated proteins
126609614
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Gene cluster
GFIT
Motif
Pfam:
GDI
RAE1_2_domI_C
NAD_binding_8
FAD_oxidored
FAD_binding_2
Motif
Other DBs
NCBI-GeneID:
126609614
NCBI-ProteinID:
XP_050133422
LinkDB
All DBs
Position
17:complement(4652211..4656452)
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AA seq
563 aa
AA seq
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MSQLFDDRIPITPSTFDLIVIGTGLPGSVIAAAASTAGKAVLHLDTNQFYGGHFASLPLD
DLFPFLNSHASPPSSSSTTTTTTTITGHDDYTALPLTRRLLYSDIETVTYAPQALAQHNP
KRFYIDLSGPKVLFLADKATDLLWRSGVSPFLCFKGIEMKSIYDDIGELWNVPDSRVAIF
KDKRLSLMEKNKLMRFFKLVWQHLEAASDEQGSEGNSESRKISDEDLESPFVDFLNRMEL
PHRIKSIILYAIAMVDYDQDDLEACKSILKTRDGIERLAIFYKSRLTNAPEAMIYPMYGH
GNLSGVISRRAAVKGCVCAQRVPVAVLTDKDSGQYKGVRLASGQNLYSDQLVMDPTFKVP
SLPISSPPDVRASPQVLSLKDDKRKVARGICITTSSLKPDISNCLLVYPPGSLYPEQEAS
IRAIQIGGSSAEVCPKGMFVVYLSVLCDDAKQGKMLLRDAMNALLKLALSGNPYDRTLDS
EDAEVKPTLLWSMLYVQELTTDEQGYFLSTPMPDANLDYNDLIDSTAVLFQTLYPHEEFF
PGTHAVDNLEDDGSDVDAPKGTE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaactctttgatgaccgcattcctatcacgcccagcacctttgaccttattgtt
attggaacgggcctccctggatccgtgattgctgccgcagcttctactgccggaaaagct
gttcttcaccttgacactaaccaattttacggcggccacttcgcctctcttcccctggat
gatctctttcccttcctaaattctcatgcttccccaccctcctcctcctccacaaccact
accaccaccacaattacgggacatgatgattacactgccttacccctcacccggcgcttg
ctctactccgacattgagacggttacctatgcccctcaagcccttgcccagcataacccc
aaaagattctacattgaccttagcgggcccaaggttttgtttcttgcagacaaagccacg
gaccttctgtggagatcgggcgtgtcaccatttttgtgtttcaagggcattgaaatgaag
tccatttacgatgatattggggagttgtggaacgttccagactctcgagtagcaatattc
aaagacaagaggctaagcctcatggagaagaataagctgatgaggttcttcaagcttgtt
tggcagcacctggaagcagcctctgacgaacaagggagtgaaggaaatagtgagagtagg
aaaatttcagatgaagatttggagagtcccttcgttgatttcttaaacagaatggaattg
ccacacaggatcaaatcaattattttgtatgccattgccatggtagactatgatcaagac
gacctggaagcttgtaaaagtatacttaagacaagagatgggatcgagcggttagcaatc
ttctacaaatcgaggttgacaaatgcacctgaggctatgatttatcctatgtatggtcat
gggaacttatcaggagttataagccgccgcgctgctgttaaaggctgcgtttgtgctcaa
cgagttccagttgccgtgcttacggacaaggacagtggccaatataaaggtgtgagatta
gcttctggtcagaatttgtatagtgatcagctagttatggatccaactttcaaggtccca
tcgctgccaatttcatccccaccagacgtgagagcaagtcctcaagttttaagtctgaaa
gatgataaacgaaaggtggctaggggaatatgtattacaaccagttcactgaagccagat
atatcaaactgtttgcttgtatatcctccaggatctttgtaccctgagcaagaagcttcg
atccgggcaatccaaataggtggaagttcggctgaagtttgtccaaagggcatgtttgtt
gtgtacctttctgttttatgcgatgacgccaaacaagggaaaatgttgctacgtgatgcc
atgaatgcgcttctcaaacttgcgctttctggaaacccttatgatcgcactcttgatagt
gaagatgcagaagtaaaacctactttgttatggagcatgttgtatgttcaggagctgact
acggatgaacagggttatttcctctcaactccgatgccagatgcgaatctggactacaat
gatctcatagattcaactgcggtgcttttccagacgttgtatccacatgaagaattcttt
ccagggacacacgcggttgataatttggaggatgatggcagtgacgttgatgccccgaaa
gggactgagtga
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