Malus sylvestris (European crab apple): 126609887
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Entry
126609887 CDS
T09027
Name
(RefSeq) exportin-T-like isoform X1
KO
K14288
exportin-T
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126609887
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126609887
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
126609887
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-T
Xpo1
Motif
Other DBs
NCBI-GeneID:
126609887
NCBI-ProteinID:
XP_050133778
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Position
17:complement(16595962..16604089)
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AA seq
989 aa
AA seq
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MDDLEKAVLILFDESGTVDSELKQKAKDYCDKIKEEQAICSVCIERLCFSNLVQVQFWCL
QALHEVIRVRYSSTSLDEKFFIRKSVFSIACLGGFDDKSTVRVLEGPAFIKNKLAQVLVT
LIYYEYPLIWSSVFVDFLSQLNKGAVLIDMFCRVLNALDEEVINLDYPRTPEELSVAAGI
KDAMRQQCVAQIVRAWYEIVSMYRKSDEELCASVLESMRRFISWIDIGLIVNDAFIPLLF
ELVLVDGLSEQLRSAAAGCLSAVVLKRMDPQAKLPLLQSLQMHRVFGLVAQDNDSELVSN
IAALLTGYAVEVLECFKRLNSEDAKGISMELLNEVLPSVFYVMQNCELDSAFSIVQFLSG
YVGTMKTLSSLRETQVGHVGQILEVIHSQIRYDPMYRENLDILDKIGKEEEDRMVEFRKD
LFMLLRNVGRVAPDVTQIFIRNSLATAVGSSLDWNVEEVEVALSLFYAFGESINGEAIRT
GSGLLGELVPMLLSTRFLCHSNRLVALVYLETVMRYMKFVQENTQYIHLVLAAFLDERGI
RHPNVNVSRRAGYVFMRVVKLLRVKLVPFIENILQNLQDTVAGFTRMDYTSKELSGSEDG
SHIFEAIGLLIGMEDVPPAKQSDYLSSLLTPLCQQVEALLMNAKVLTPEEAPQKFANIKQ
IIVAINSLSKGFSERLVTASRPALGLMFTETLDVLLQVLVVFPNVETLRSKVTSFVHRMV
DTLGASVFPYLPKALEHLLVDSEPKELVGLLLLLNQLICKFNTLFRDILDEVFPAITGRI
LNIIPVDTLPSGPGFNTEENRELQELQRTLYTFLHVITTHDLSSVFLSPKSRIYLEPIMQ
LLLFTSCKHKDILVRKACVQIFIRLIKDWCAMPNGEEKVPGFQSFIIETFATNCCLYSLL
DTSFEFRDANTLVLFGEIVLAQKVMFEKFGNDFLAHFVSKGFPAAHCPQDLAEKYCQQLQ
GSDIKALKSFYQSLIESLRRQQNGSLVVR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggatgatctcgaaaaagcagtacttatattgtttgatgagtcgggcaccgttgattcc
gagctgaaacagaaggcaaaagattactgtgataaaattaaggaagaacaggcgatatgt
agtgtctgtattgagaggttgtgcttttcgaatttagttcaagttcagttttggtgctta
caggctctgcatgaggttattagagtccggtactcgtcgacgagtctagatgagaagttt
tttatcaggaagtcggtgttttcgattgcatgtcttggtgggtttgatgataagagtact
gttagggttttagaaggtcctgcatttataaagaataaacttgctcaggttttggtgact
ttgatttactatgagtacccattgatttggtcgtcggtgtttgttgattttttgtcacaa
ctgaataaaggggcagtgttgattgatatgttctgccgggttttgaatgctttggatgag
gaagtgattaatttggactaccctcggacaccggaggaactatcagtggcagcggggatt
aaggatgctatgaggcagcagtgtgtagcacaaatagttagagcctggtacgagattgtg
tctatgtataggaagtctgatgaagagctttgtgctagtgtattagaatcaatgaggagg
tttatctcttggattgatattggtttaattgtgaatgatgcctttatcccgttattgttt
gagttggttttggttgatgggctctctgaacaactccgtagtgctgcagctggatgtttg
tcagcagtagtattgaaaaggatggatccacaggcaaaactaccgcttttgcaaagtctt
caaatgcatcgggtttttggactagtagctcaggataatgactcagagttggtatctaat
atagctgcattgcttactgggtatgcggttgaggttcttgagtgctttaaacggttgaat
tctgaggatgccaagggtatttcaatggagctcttgaatgaagttttgccctctgtattt
tatgtcatgcagaactgtgagttggactcggcatttagcattgtgcaatttctttcaggt
tatgttggcacaatgaagactctttcctcattgagggaaacacaggtgggtcatgtaggt
cagattttggaagtgatccattcacagatccgctatgatcctatgtaccgtgaaaatcta
gatatattggataaaattggaaaagaggaggaagataggatggtggagtttagaaaggat
ttgtttatgctgctgcgtaatgtaggtcgtgtagcacctgatgtcactcagatatttatt
agaaactcattggctactgctgttggatcatccttagactggaatgttgaagaggtggaa
gttgcactttctcttttctatgcatttggcgagtcaataaatggtgaggcaattagaact
gggagtggtctattgggtgaattggtaccaatgcttttatctacaaggttcctttgccat
tcaaataggctagttgcactggtgtatctagagacagtaatgagatacatgaagtttgtt
caggagaatacccaatatattcacttggttttggctgcctttcttgatgaaaggggtata
cgccatccaaatgtcaatgtgagtagaagggcgggttatgtgtttatgagggttgtgaaa
ttgctgagagtgaagcttgtgcctttcatagaaaatattttgcagaatttacaagataca
gttgctgggtttacaagaatggattatacatcaaaagagctttcaggatctgaagatggt
agtcacatttttgaggcaattggtttattgattggcatggaagatgtaccaccagcaaag
cagtctgattatctctcttcacttctcactcctctttgtcagcaggttgaagcattgctc
atgaatgccaaagtactgactccagaagaggcacctcaaaaatttgctaatattaagcag
ataattgtggcaattaattctcttagcaagggcttcagcgagcgtcttgtgactgctagt
cgccctgcacttggtctcatgttcacggagacattagatgttcttcttcaagtactagtg
gtgtttcctaatgtagagactttgcgcagtaaggtaacatcatttgtacaccgcatggtg
gacactctaggagcatctgtttttccttacctcccaaaggcactggagcacttgcttgtg
gatagtgagccaaaggaattggttggtttgcttctattgctcaatcaactgatatgcaag
ttcaacacattattccgtgacatactggatgaagtatttcctgctataactggtaggata
ttaaatattattccggtagacacactcccttcaggacctggattcaatactgaggaaaat
cgggaattgcaagaacttcagcgaacattatatacatttcttcatgtgataactacacat
gatctatcttctgtattcctatcccccaagagtaggatctacttagaaccaattatgcag
ttgctgttgttcacgtcttgtaagcacaaggatattcttgtaagaaaggcatgcgtacag
atatttattaggctgattaaggattggtgcgcgatgcctaatggcgaagaaaaggtacct
ggtttccagagttttataatagagacctttgctacgaactgttgtttgtacagcctgctg
gacacctctttcgaatttcgtgatgcaaatactctcgttttgtttggagaaattgtactg
gctcagaaggttatgtttgaaaagtttggcaatgattttctagctcactttgtctcaaag
ggttttccagcagcacattgcccccaagatttggctgagaaatattgccagcagctgcag
ggtagtgatataaaggctttgaagtcattctaccagtcacttatcgaaagtttgagacgt
cagcagaatgggagccttgttgtcagatag
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