Malus sylvestris (European crab apple): 126610040
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Entry
126610040 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126610040 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126610040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126610040
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
126610040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
126610040
NCBI-ProteinID:
XP_050133971
LinkDB
All DBs
Position
2:11105744..11113775
Genome browser
AA seq
1052 aa
AA seq
DB search
MEPATLTNSMDLKIGELLKEVQLDYSPAFTKAVDDAVSVIKRAIDKIPEGLNVTADEARG
FVRDIGADKVEFTFKKPKSIEIGGSYAIQCIVKPEVNVDLFVRMPKECFHEKDYLNYRYH
TKRCLYLCVIKKFLKSSSLVEWSTLQNEARKPVLIVYPGVKPVEVPEFCVRIIPTAPSLF
NIPKLHLERNNVRALNQGGVPQATPKYNSSILEDMLIEDTEEILKKTFLGWKELQEALIL
LKVWARRRTPIYAYDCLGGYLISVILSYLADRNRIKKSMTTMHIFRFTLSFLANSELWKH
GLYFTPKDQKAISKEKRLPLKESFPVVICSPATNFNLAFRMTRAGFLELQDESASTLACI
DKCRDGGFEEIFMTTVDYPVKYDHIIRLNLKGNSAVYASGFCLDDECWRLYEQKVQSVLI
QGLGDRVKNVRVTWRNMLSDRIIKNGLSTLNAEPLLIGISVSSIEKAFRLVDIGPDADNK
EEALKFRKFWGEKSELRRFKDGKIAESTVWESEQWKRHIVLKRISEYVLLRHLSVSKENI
MHIVDQLDFSLLYGAGDPISSSGNLLGAFEILSKRLRLLEDIPLKVSTVQPLDSAFRFSS
VFPPEPHPLANEKGAFVRLHRFTPSCIRPLEVMIQLEGSGNWPMDDVAIEKTKSAFLLKI
GESLQNNWGMTCTATEDDVDVFVSGYAFRLKIWHERGLTLLRRETGNDQVKQVSNTDREL
YFRSQHSSMINGLQGCYAAYGPVVRLAKRWVASHLFSACLGEEAIELLVAYVFLKPLPFN
APCSRITGFLRFLRLLSDYDWNFSALIVDINNDLTPKDMKEINDNFMSSRKTNEENVQSV
NPAMFLATTYDKASDAWTRFSPNSMELKRLMAYAGSSAKLLTKLVSEDHDDKHRWECLFR
TPLNNYDAVILLHREKLPYPQHLLFPSELNQGAGVHVACGNASKVFHPFLLPGDIKGNSE
ALRNKLLVNFDPLRCFVGDLEAKYPNTFKLWYDCLGGDAVGITWGRYGSKKRGREEEAEE
VKDPTGLLKNIGEVGTGFVRGVYLLKAPRLTS
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggagcccgctacgctgacgaactcaatggacctaaagattggggagctcttgaaagag
gtccagctcgactattcacccgcattcaccaaggccgtcgacgacgccgtttcagtcatc
aaaagagccatcgacaaaatcccagaaggcctcaatgttacagctgatgaagcgcgggga
ttcgtcagggacattggcgctgacaaggtcgaattcacgtttaagaagccgaaatctatt
gaaattggtgggagttatgccatacagtgcattgtgaaacctgaagttaatgtggacctc
ttcgttcggatgcccaaggagtgtttccatgagaaagactatttgaattaccggtaccat
acgaaaaggtgcctgtacctttgtgtaataaaaaagtttttaaagtcttcttcattagtt
gaatggtccaccttacagaatgaagcccggaaacctgtattgattgtctatccaggcgta
aaacctgtcgaagtccctgagttttgtgtaaggataattcctacagcaccgtcccttttc
aacattccaaagttgcacctagagcggaataatgttcgtgctctaaatcaagggggagtt
cctcaggctactcctaagtacaatagtagtattttggaagacatgcttattgaagatact
gaagaaattctcaagaaaacttttctcgggtggaaagaattacaagaggcattaattttg
ctgaaggtctgggctcgtcggagaacaccaatatatgcttatgattgcttgggcggatat
ctgatctctgtcatattgtcgtaccttgcggataggaatcgtattaaaaagtcaatgacg
acaatgcacatattccgttttactctgagcttccttgccaattcagaactttggaaacat
gggctctactttacaccgaaagaccaaaaagctatttcaaaggagaaaaggttgcctctt
aaagaatcatttccagttgtcatatgtagtccagctacaaactttaatttggccttccga
atgacaagggctggatttcttgagctccaagatgagtctgcttcgacacttgcatgcata
gacaaatgtagagatggtggatttgaagaaatttttatgaccacggtggactatcctgta
aaatatgaccacatcataaggttgaacttaaaagggaacagtgcagtttatgcatcagga
ttttgcttggatgatgaatgttggagattgtatgagcagaaggtgcagagtgttttaatt
caagggttgggtgacagagtgaagaatgtacgtgttacctggagaaatatgttatcagac
cgcatcataaaaaatggattgtcaaccctcaatgcagagccattgcttattggaatttcc
gtgagctccatagagaaagcttttaggcttgtagatattggtccagatgctgataacaaa
gaggaggccctcaaattccgcaagttctggggggaaaagtcggagctcaggagatttaaa
gacggtaaaattgcagaaagcacagtttgggaaagtgagcaatggaaaagacatatcgtc
ttaaaaaggatttctgagtatgtgcttctgcgacatctttctgtatcaaaagagaatata
atgcacattgtggatcaacttgatttctctttgctatatggtgctggagatcctatatca
tcttctgggaatttgcttggggcatttgaaattctatcgaagcgcttgcggcttcttgaa
gacattccactgaaggtttctactgtgcagcccctagattcagctttcaggttttcatct
gtattcccacctgaacctcatccgcttgctaatgagaagggtgcttttgtaagattacat
aggttcactccttcctgcattcgtccgctggaagttatgatccagttggaaggttctgga
aactggccaatggatgatgtagcaattgagaaaactaaatctgccttccttctcaagatt
ggagagagtctccagaataattgggggatgacgtgtacagctacggaggatgatgtggat
gtttttgtttctggatatgcatttcgcctaaaaatttggcatgagagaggcctgactttg
ttgagacgggaaactggaaatgatcaagtgaagcaggtctctaatacggacagagaactt
tatttccggagtcaacattccagcatgattaatggattacagggttgttacgcagcatac
gggccagttgttaggcttgcaaaacggtgggtagcttcacatctgttttcggcttgcttg
ggggaggaggcaattgaactattggttgcatacgtctttttgaagcctttaccattcaat
gctccatgctcacgaatcactggatttttgaggttcctgcgattactatcagattatgac
tggaatttttctgcattaattgtcgacataaacaatgatttgactccaaaagatatgaaa
gagataaatgataatttcatgtcaagtagaaaaactaatgaagaaaatgtgcaaagcgta
aacccagcaatgttcttggctacaacttacgacaaggcatccgatgcctggaccagattc
tcaccaaactcgatggagttaaaaaggttgatggcttatgctggaagcagtgcaaagttg
ttgaccaaactggtatcagaggatcatgatgataagcatagatgggagtgcctttttcga
actcctttgaacaattacgacgcagttattcttcttcacagagaaaaattaccttacccc
caacatcttctctttccatccgaattaaatcaaggtgcaggggtacatgtggcatgtggt
aatgcgagcaaggttttccacccatttctgttgcctggagacatcaaaggaaattcggag
gcactaagaaataagctattggtaaactttgatccactgaggtgctttgtcggggatcta
gaggcaaagtaccccaacaccttcaagctatggtatgattgtctgggtggtgatgctgtt
ggcataacgtgggggagatatggttcaaagaaacgagggcgggaagaagaagcagaggag
gtaaaagatccaactggtttattaaaaaacattggtgaagtgggaacaggatttgtgaga
ggggtttatcttctcaaggccccaaggctcacgagttaa
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integrated database retrieval system
