KEGG   Malus sylvestris (European crab apple): 126610202
Entry
126610202         CDS       T09027                                 
Name
(RefSeq) sm-like protein LSM1B
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126610202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126610202
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126610202
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     126610202
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 126610202
NCBI-ProteinID: XP_050134152
LinkDB
Position
17:complement(16148450..16155663)
AA seq 128 aa
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq 387 nt   +upstreamnt  +downstreamnt
atgtcttgggcaggcccagaagatgtctacctttccacttctctggccagctatcttgac
aagaaacttcttgtgctgctccgagatggtcgaaaacttttggggatacttcgatcgttt
gatcaattcgccaatgctgttcttgagggtgcttgtgagagagtcattgttggcgatctt
tactgtgatatccctttgggtctgtacgtaatccgtggggagaatgttgttctaatcggc
gagctggattcagagagggaggaacttccaccgcacatgactcgtgtttcagctgcagaa
attaaaagggcacagaaagcagaaagggaagcttctgatcttaaaggtacaatgagaaaa
agaatggagttccttgatatggattaa

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