Malus sylvestris (European crab apple): 126610279
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Entry
126610279 CDS
T09027
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
msyl04517
IgSF CAM signaling
msyl04519
Cadherin signaling
msyl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126610279
04519 Cadherin signaling
126610279
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126610279
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
126610279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126610279
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msyl04812
]
126610279
Membrane trafficking [BR:
msyl04131
]
Others
Actin-binding proteins
Arp2/3 complex
126610279
Cytoskeleton proteins [BR:
msyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
126610279
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR55
EIF3I
Beta-prop_EML
Tricorn_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
eIF2A
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_NUP159_NUP214
Ge1_WD40
DUF2582
BNR_3
Motif
Other DBs
NCBI-GeneID:
126610279
NCBI-ProteinID:
XP_050134249
LinkDB
All DBs
Position
17:complement(12836103..12841033)
Genome browser
AA seq
378 aa
AA seq
DB search
MAAVEVHKFAQCITCHAWSRDRSMLAFCPNNNEVHIYALLQGKWEKLHVLQKHDQIVSGI
DWSARSNKIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVKWSPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRIFSTFIKVVDA
KESRTGPFADSKFGEQILQLDLSFSWSFGVRWSPSGSTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFLSERLLIGVGFDCNPMVFAADLHGIWHFIKFLGERKTTSSGPKYG
SQFSEAFGKLYGQQKHGLNNDTNEHSRSRGGVHENCINCIVPLGEPGSSKVTRFSTSGLD
GKVVVWDMENQADLSEYL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggaagttcacaagttcgctcaatgcattacttgccatgcttggagccgt
gatcgctccatgctggcattttgtccgaacaacaatgaagttcacatctatgctctgttg
caaggcaagtgggagaagctgcatgttcttcagaagcatgaccaaattgtatctgggata
gattggagcgcaaggtcaaacaaaatagttactgcatctcatgatcggaattcctatgtc
tggaatctagaagggtctgagtgggtaccaacccttgttatccttcggctaaatcgcgct
gcactttgtgttaagtggagtccaagagaaaataagtttgctgttggaagtggggcaaaa
actgtttgtatatgctactatgagcaagaaaataactggtgggtcagtaaacttatcaga
aaaaggcatgactcttctgtgacaagtgttgcgtggcatcccaataatattcttcttgca
acagcatctacagatggaaaatgccgtatattttccacttttattaaggtcgtcgacgca
aaggaatcaagaacaggcccatttgctgattcaaaatttggagagcaaattcttcagctt
gatctctcattttcctggtcatttggcgtgaggtggtcaccgagtggcagtaccttagca
tatgtaggccataattctatgatttacttcgttgatgatgtgggaccttctcctttggct
cagaatgttgcattccgtgatttgcctctccgtgatgtgttatttctttctgaaagatta
cttataggtgtgggatttgattgcaatccaatggtttttgcggcagatttacatggaata
tggcattttatcaaatttcttggggaaagaaagacaacatcttcaggtccaaaatatggt
tcacagttttctgaagcatttggaaagctatatggccaacagaaacatggattgaacaat
gatacaaatgaacattcaagatcacgaggaggcgtccatgagaactgcattaattgtatc
gtgccacttggagaaccagggagttctaaagtaacgcgcttcagcacatcaggattggat
ggaaaagttgttgtgtgggatatggagaaccaagcagatttatcggagtatttgtga
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