Malus sylvestris (European crab apple): 126610279
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Entry
126610279 CDS
T09027
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-like isoform X1
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04144
Endocytosis
msyl04517
IgSF CAM signaling
msyl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
126610279
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126610279
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
126610279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126610279
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
msyl04812
]
126610279
Membrane trafficking [BR:
msyl04131
]
Others
Actin-binding proteins
Arp2/3 complex
126610279
Cytoskeleton proteins [BR:
msyl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
126610279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WDR55
EIF3I
Beta-prop_EML
Tricorn_2nd
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
PD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
Beta-prop_SPT8
eIF2A
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_NUP159_NUP214
Ge1_WD40
DUF2582
BNR_3
Motif
Other DBs
NCBI-GeneID:
126610279
NCBI-ProteinID:
XP_050134249
LinkDB
All DBs
Position
17:complement(12836103..12841033)
Genome browser
AA seq
378 aa
AA seq
DB search
MAAVEVHKFAQCITCHAWSRDRSMLAFCPNNNEVHIYALLQGKWEKLHVLQKHDQIVSGI
DWSARSNKIVTASHDRNSYVWNLEGSEWVPTLVILRLNRAALCVKWSPRENKFAVGSGAK
TVCICYYEQENNWWVSKLIRKRHDSSVTSVAWHPNNILLATASTDGKCRIFSTFIKVVDA
KESRTGPFADSKFGEQILQLDLSFSWSFGVRWSPSGSTLAYVGHNSMIYFVDDVGPSPLA
QNVAFRDLPLRDVLFLSERLLIGVGFDCNPMVFAADLHGIWHFIKFLGERKTTSSGPKYG
SQFSEAFGKLYGQQKHGLNNDTNEHSRSRGGVHENCINCIVPLGEPGSSKVTRFSTSGLD
GKVVVWDMENQADLSEYL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggaagttcacaagttcgctcaatgcattacttgccatgcttggagccgt
gatcgctccatgctggcattttgtccgaacaacaatgaagttcacatctatgctctgttg
caaggcaagtgggagaagctgcatgttcttcagaagcatgaccaaattgtatctgggata
gattggagcgcaaggtcaaacaaaatagttactgcatctcatgatcggaattcctatgtc
tggaatctagaagggtctgagtgggtaccaacccttgttatccttcggctaaatcgcgct
gcactttgtgttaagtggagtccaagagaaaataagtttgctgttggaagtggggcaaaa
actgtttgtatatgctactatgagcaagaaaataactggtgggtcagtaaacttatcaga
aaaaggcatgactcttctgtgacaagtgttgcgtggcatcccaataatattcttcttgca
acagcatctacagatggaaaatgccgtatattttccacttttattaaggtcgtcgacgca
aaggaatcaagaacaggcccatttgctgattcaaaatttggagagcaaattcttcagctt
gatctctcattttcctggtcatttggcgtgaggtggtcaccgagtggcagtaccttagca
tatgtaggccataattctatgatttacttcgttgatgatgtgggaccttctcctttggct
cagaatgttgcattccgtgatttgcctctccgtgatgtgttatttctttctgaaagatta
cttataggtgtgggatttgattgcaatccaatggtttttgcggcagatttacatggaata
tggcattttatcaaatttcttggggaaagaaagacaacatcttcaggtccaaaatatggt
tcacagttttctgaagcatttggaaagctatatggccaacagaaacatggattgaacaat
gatacaaatgaacattcaagatcacgaggaggcgtccatgagaactgcattaattgtatc
gtgccacttggagaaccagggagttctaaagtaacgcgcttcagcacatcaggattggat
ggaaaagttgttgtgtgggatatggagaaccaagcagatttatcggagtatttgtga
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