KEGG   Malus sylvestris (European crab apple): 126610337
Entry
126610337         CDS       T09027                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126610337
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126610337
   03041 Spliceosome [BR:msyl03041]
    126610337
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     126610337
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     126610337
Spliceosome [BR:msyl03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    126610337
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 RRM_RdRP1_2 SF3a60_bindingd
Other DBs
NCBI-GeneID: 126610337
NCBI-ProteinID: XP_050134343
LinkDB
Position
17:complement(1602913..1605336)
AA seq 365 aa
MTPTSKAKLRTITSQTTDTRRRRMTTTAGPSLKLATAPAPAQFIKYFGAYGEIIDSVIMK
DRKTGQPRGFGFVTYADPSVVDRVIEETHVINGKQVEIKRTIPRGAMGSKDFKTKKIFVG
GIPTTVNEEEFSDFFSQYGEVKEHQIMRDHSTGRSRGFGFVTFDTDQAVDELLDKGNKLD
FAGAQVEIKKAEPKKPNQPAPPSKRYNDSRPAYGGGYGESYGGYGGGSYGGAGAYRSAAA
YGGRGSAYGGYGGSEFGGYGVYGGGGGGGGGGIGAYRGESSMGYSGRYGGAYSRGYDIGG
GYGGAGEGYGGYGGAGGAAGGSGYGSGYDAGFGGGYGGGSGASFYGSRGGGYGGAGSGRY
HPYGR
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaccccaacctcgaaggcgaagctcaggacaataaccagccagaccacagacacgaga
cggcggaggatgacgactacggcaggtcccagcctcaaactggcgacggcgccagccccg
gcgcaatttataaagtattttggtgcgtacggtgagattatagattcagtgataatgaag
gaccggaagacggggcaaccccgtggtttcgggtttgtgacgtatgcagacccctctgtg
gttgatagagtcattgaggagactcatgttatcaatggcaaacaagtcgaaatcaagcga
acaataccccggggagcaatggggtctaaggatttcaagactaagaagatatttgtgggt
ggaattccaacaaccgtaaatgaagaggagtttagcgacttcttttcacagtacggagag
gttaaggaacatcagattatgcgggaccactccaccggtcgctcccgtggatttggattt
gtcacctttgacacagatcaagcggttgatgaactcttggacaaggggaacaagcttgat
tttgctggagctcaggtggagataaaaaaggcagagccaaagaagccaaaccaacctgca
ccaccatcgaaacgttataatgattctagacctgcatatggtggtgggtatggagaaagc
tatggtggatatggaggtggcagttacggtggtgctggtgcttataggtcagctgctgcc
tatggtggcagagggagtgcttatggaggatatggtggcagtgaatttggcggatatgga
gtatatggcggtgggggcggtgggggcggtggtggtataggggcttatagaggagaatcc
tccatgggatattcaggccgttacggaggagcctacagcagaggttatgatataggaggc
ggttatggtggagctggggagggttatgggggatatggaggtgctggcggggcagctggt
ggcagtggttatgggagtggctatgatgcaggttttggaggtggctacgggggtggtagt
ggagcttccttttacggtagtagaggagggggatatggtggtgcaggtagcggtcgatat
catccatatgggaggtag

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