KEGG   Malus sylvestris (European crab apple): 126610351
Entry
126610351         CDS       T09027                                 
Name
(RefSeq) ESCRT-related protein CHMP1B
  KO
K12197  charged multivesicular body protein 1
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03272  Virion - Hepatitis viruses
msyl04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    126610351
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126610351
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:msyl04131]
    126610351
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:msyl04147]
    126610351
Membrane trafficking [BR:msyl04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    126610351
Exosome [BR:msyl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126610351
  Exosomal proteins of other body fluids (saliva and urine)
   126610351
  Exosomal proteins of colorectal cancer cells
   126610351
SSDB
Motif
Pfam: Snf7 Ist1 Ham1p_like
Other DBs
NCBI-GeneID: 126610351
NCBI-ProteinID: XP_050134356
LinkDB
Position
17:20127390..20128449
AA seq 203 aa
MGNTEKLMNQIMELKFTSKSLQRQSRKCEKEEKSEKLKIKKAMEKGNVDGARIYAENAIR
KRTEQMNYLRLASRLDAVVARLDTQAKMFTINKSMGNIVKSLESSLATGNLQKMSETMDS
FEKQFVNMEVQAEFMETAMAGSTSLSTPEGEVNSLMQQVADDYGLEVSVGLPQPAAHAVP
AKETEKVDEDDLSRRLAELKARG
NT seq 612 nt   +upstreamnt  +downstreamnt
atgggaaacaccgagaagctgatgaaccagatcatggagctcaaattcacctccaagtcg
cttcagcgccagtccaggaagtgcgagaaggaggagaaatccgagaagctcaagatcaag
aaggcaatggagaaaggcaacgtcgacggcgcccggatctacgccgagaacgccatccgg
aagcgcaccgagcagatgaactacctccgcctcgcctcgcggctcgacgccgtggtggcg
cggctcgacacccaggccaagatgttcaccatcaacaagtcgatgggcaatatcgtcaaa
tcgcttgagtcgtcgctggccaccggaaacctccagaagatgtcggagaccatggactcg
ttcgagaagcagttcgtgaacatggaggttcaggccgagttcatggagaccgctatggct
ggctccacctcgctttcgacaccggaaggtgaggtcaatagcttgatgcaacaggttgcg
gatgactatggccttgaggtgtccgtcggcctgcctcagccagctgcacatgccgtgccc
gccaaggaaaccgagaaggtcgacgaggacgacctctccaggaggcttgcggagctcaag
gctagaggttaa

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