Malus sylvestris (European crab apple): 126610389
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Entry
126610389 CDS
T09027
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126610389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126610389
03036 Chromosome and associated proteins [BR:
msyl03036
]
126610389
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126610389
Coactivators
SAGA/TFTC/STAGA complex
126610389
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126610389
STAGA complex
126610389
TFTC complex
126610389
SAGA complex
126610389
SLIK complex
126610389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
126610389
NCBI-ProteinID:
XP_050134402
LinkDB
All DBs
Position
17:complement(16899783..16905830)
Genome browser
AA seq
630 aa
AA seq
DB search
MAENGPSSSPNPLQPNIDPAAAVASPSNVMITQNPAIPSSSTLSQSPQIASPPLPPLPNV
SLPQTQHISPPVGLDYAQKSTQQQQQLQQQSQSLVQQSQNVNVNSMSNYQLQQSLQRTPS
MSRMNQLQPLSQNPQQQQQHFGMMRQQGGLYGQVNFGGPGGIQQQNQQQQQQNQAQQTQQ
LGGGNLSRSALIGQSGHLPMLSGPAAVAAAQFNLQPQLLASPRQKGSLVQGSQFHHGNSP
GQSLQGTQAMGVMGSINLSSQLRANGAIASFAQQRINQGQGQLRQQLAQQSPLTSAQVQS
LPRTSSLSFMNPQLSGVSQNGQPAMIQNSLSQQWLKQMPASPGPGSPSPSPSSRLQQHRQ
QVLYQQQLASNQLQKSMPLTPQQFNQLVQQQQQMGHPQLQQQQHQQQLQQQQIQQPLQQQ
SQQQQQQQLSSPRMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKI
QDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKN
WHLTIPGFSSEERKCQNKSLSSDLHKKRLDVIRTLMESSNLEKNPNTPKEMIRGFGNAVG
TNHLIRPSLGAEQLVSQSTGSQMLQQMTRF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacggcccatcgtcgtccccaaaccccctccaacccaacattgacccagca
gcagcagtagcatcaccctcaaacgttatgatcacccaaaacccagcaatcccatcctct
tcaactctctcccagtctccacaaatcgcatccccacctctccctcccctgcccaacgtc
tcgcttcctcaaacccagcacatttcgccccccgtcggattggattacgcgcagaaatcg
acccagcagcagcaacagctgcaacagcaatctcagtcattggtgcaacaatcccagaac
gtgaatgtgaattccatgtcgaattaccagctccagcagagtctgcagaggacgccgtcg
atgtcccgaatgaaccagcttcagccgctgagccagaacccgcagcagcaacagcagcat
ttcggtatgatgaggcagcaagggggtttgtatgggcaggtgaattttggtggccctggt
ggtatccaacagcagaatcagcagcagcaacagcaaaaccaggcacagcagactcagcaa
cttggcggtgggaacttgtcgcgatcagccttgatcgggcagagtggccacctgcccatg
ttgtctggccctgctgctgttgcagctgcgcaattcaatctgcagccgcagttgttggcc
tcgccgaggcaaaaaggcagcctggtccaaggttcccaatttcatcacggtaattctcct
gggcaatctttacaaggaacacaagcaatgggggtgatgggatccatcaatttgagctcg
caactaagagctaatggggccattgcttcttttgctcaacagagaataaatcaggggcag
ggccaacttaggcaacagttggcccaacagagtccgctcacctctgcacaggttcagagc
ttgccaagaacatcttcactatcttttatgaaccctcagttatctggtgtgtctcagaat
ggacagccagcaatgatacagaattctttatcacaacagtggttgaagcaaatgccagca
agtcctggccctggttcaccttcaccttcaccttcatcgcgtcttcaacaacataggcag
caggttctctatcagcagcaactggcttctaatcagttgcagaagtctatgcccttgacc
ccgcaacagtttaaccagcttgtacagcagcagcaacaaatgggacatccacagctgcaa
cagcagcagcatcaacagcaacttcagcagcagcaaatacagcagccactacaacaacaa
tcgcagcagcagcagcagcaacagctgagttccccaaggatggctggacccgcaggccag
aaatctcttagtttaacaggatcacaccctgatgctgctgcatctggtactaccacacct
ggagggagttcaagccaaggaacagaagcaactaaccaacttctcgggaagagaaagata
caagatttagtctctcaggttgattcacaaggcaggctggatcctgaagttgaagatctt
ctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgcaatttggca
aagcatagaaaatcttcaactttagagtccaaggatgtgttgctacatctagagaaaaat
tggcatttgacaattcccgggttttcaagtgaggagaggaagtgccaaaacaaatctttg
tcaagtgatctccataagaagcgtttggatgtgatacggacgctgatggaatcatcgaac
ctggaaaaaaatcccaatactcctaaagagatgatcagggggtttggcaatgcagttggt
accaaccacttgattagaccatctcttggtgcagaacagttggtttcacaatcaactggt
tctcaaatgctgcagcaaatgactcggttttaa
DBGET
integrated database retrieval system
