Malus sylvestris (European crab apple): 126610389
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Entry
126610389 CDS
T09027
Name
(RefSeq) transcription initiation factor TFIID subunit 12b-like
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126610389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126610389
03036 Chromosome and associated proteins [BR:
msyl03036
]
126610389
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126610389
Coactivators
SAGA/TFTC/STAGA complex
126610389
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126610389
STAGA complex
126610389
TFTC complex
126610389
SAGA complex
126610389
SLIK complex
126610389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
Histone
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
126610389
NCBI-ProteinID:
XP_050134402
LinkDB
All DBs
Position
17:complement(16899783..16905830)
Genome browser
AA seq
630 aa
AA seq
DB search
MAENGPSSSPNPLQPNIDPAAAVASPSNVMITQNPAIPSSSTLSQSPQIASPPLPPLPNV
SLPQTQHISPPVGLDYAQKSTQQQQQLQQQSQSLVQQSQNVNVNSMSNYQLQQSLQRTPS
MSRMNQLQPLSQNPQQQQQHFGMMRQQGGLYGQVNFGGPGGIQQQNQQQQQQNQAQQTQQ
LGGGNLSRSALIGQSGHLPMLSGPAAVAAAQFNLQPQLLASPRQKGSLVQGSQFHHGNSP
GQSLQGTQAMGVMGSINLSSQLRANGAIASFAQQRINQGQGQLRQQLAQQSPLTSAQVQS
LPRTSSLSFMNPQLSGVSQNGQPAMIQNSLSQQWLKQMPASPGPGSPSPSPSSRLQQHRQ
QVLYQQQLASNQLQKSMPLTPQQFNQLVQQQQQMGHPQLQQQQHQQQLQQQQIQQPLQQQ
SQQQQQQQLSSPRMAGPAGQKSLSLTGSHPDAAASGTTTPGGSSSQGTEATNQLLGKRKI
QDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKN
WHLTIPGFSSEERKCQNKSLSSDLHKKRLDVIRTLMESSNLEKNPNTPKEMIRGFGNAVG
TNHLIRPSLGAEQLVSQSTGSQMLQQMTRF
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacggcccatcgtcgtccccaaaccccctccaacccaacattgacccagca
gcagcagtagcatcaccctcaaacgttatgatcacccaaaacccagcaatcccatcctct
tcaactctctcccagtctccacaaatcgcatccccacctctccctcccctgcccaacgtc
tcgcttcctcaaacccagcacatttcgccccccgtcggattggattacgcgcagaaatcg
acccagcagcagcaacagctgcaacagcaatctcagtcattggtgcaacaatcccagaac
gtgaatgtgaattccatgtcgaattaccagctccagcagagtctgcagaggacgccgtcg
atgtcccgaatgaaccagcttcagccgctgagccagaacccgcagcagcaacagcagcat
ttcggtatgatgaggcagcaagggggtttgtatgggcaggtgaattttggtggccctggt
ggtatccaacagcagaatcagcagcagcaacagcaaaaccaggcacagcagactcagcaa
cttggcggtgggaacttgtcgcgatcagccttgatcgggcagagtggccacctgcccatg
ttgtctggccctgctgctgttgcagctgcgcaattcaatctgcagccgcagttgttggcc
tcgccgaggcaaaaaggcagcctggtccaaggttcccaatttcatcacggtaattctcct
gggcaatctttacaaggaacacaagcaatgggggtgatgggatccatcaatttgagctcg
caactaagagctaatggggccattgcttcttttgctcaacagagaataaatcaggggcag
ggccaacttaggcaacagttggcccaacagagtccgctcacctctgcacaggttcagagc
ttgccaagaacatcttcactatcttttatgaaccctcagttatctggtgtgtctcagaat
ggacagccagcaatgatacagaattctttatcacaacagtggttgaagcaaatgccagca
agtcctggccctggttcaccttcaccttcaccttcatcgcgtcttcaacaacataggcag
caggttctctatcagcagcaactggcttctaatcagttgcagaagtctatgcccttgacc
ccgcaacagtttaaccagcttgtacagcagcagcaacaaatgggacatccacagctgcaa
cagcagcagcatcaacagcaacttcagcagcagcaaatacagcagccactacaacaacaa
tcgcagcagcagcagcagcaacagctgagttccccaaggatggctggacccgcaggccag
aaatctcttagtttaacaggatcacaccctgatgctgctgcatctggtactaccacacct
ggagggagttcaagccaaggaacagaagcaactaaccaacttctcgggaagagaaagata
caagatttagtctctcaggttgattcacaaggcaggctggatcctgaagttgaagatctt
ctcttggagattgctgatgacttcattgattctgtgacaacatatgcatgcaatttggca
aagcatagaaaatcttcaactttagagtccaaggatgtgttgctacatctagagaaaaat
tggcatttgacaattcccgggttttcaagtgaggagaggaagtgccaaaacaaatctttg
tcaagtgatctccataagaagcgtttggatgtgatacggacgctgatggaatcatcgaac
ctggaaaaaaatcccaatactcctaaagagatgatcagggggtttggcaatgcagttggt
accaaccacttgattagaccatctcttggtgcagaacagttggtttcacaatcaactggt
tctcaaatgctgcagcaaatgactcggttttaa
DBGET
integrated database retrieval system
