Malus sylvestris (European crab apple): 126610433
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Entry
126610433 CDS
T09027
Name
(RefSeq) probable alpha-mannosidase At5g13980 isoform X1
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
126610433
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
msyl04131
]
126610433
Enzymes [BR:
msyl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
126610433
Membrane trafficking [BR:
msyl04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
126610433
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
VKGC_lumenal_dom
COMMD9_HN
Motif
Other DBs
NCBI-GeneID:
126610433
NCBI-ProteinID:
XP_050134438
LinkDB
All DBs
Position
17:211896..219343
Genome browser
AA seq
826 aa
AA seq
DB search
MCMHDEAATHYIDMIDQTTLGHRFIKKEFDMTPRIGWQIDPFGHSAVQAYLLGAEAGFDS
LFFGRIDYQDRAKRKNDKSLEFIWQGSKSLGSSAQIFSGAFPEAYEPPSGFYFEVNDDSP
IVQDDITLFDYNVHDRVNDFVATAVSQANITRTNHIMWTMGTDFMYQYAHTWFRQMDKLI
HYVNMDGRVNALYSTPSIYTDAKYATNESWPIKTGDFFPYADRANAYWTGYFTSRPALKH
YVRTMSGYYLAARQLEFFIGRTDSGPNTDSLADALAIAQHHDAVTGTEKQHVANDYAKRL
AIGYTEAEQVVATSLAHLVESASYTGSVNPTTKFQQCPLLNISYCPASEMNFSEAKQLIV
MVYNSLGWKRDDVIRIPIINEDVTVHDSEGREIESQLLPLDDAHVGLRNYYAKAYLGQTP
TKTPNYWLAFTVSVPPLGFNTYTISLLGKAPLIPQNAGAYIFRPNGTFLIKPGEKASLTV
VRGPVIDEVHQQINAWIYQVTRIHKEKEHVEFEFIVGPLPTDDGIGKEVVTQLATTMATN
KTFYTDSNGRDFIERIRDYRTDWDLKVHQPIAGNYYPINLGIYMQDNSTEFSVLVDRSIG
GSSTVDGQIELMLHRRLLLDDSRGVAEALNETVCIDNVCSGLRIQGKFYFRIDPLGEGAK
WRRTFGQEIYSPLLLAFSEQDGDNWKNSHVTTFSGVGSSYSLPNNVALITLQELDDGKVL
LRLAHLYEIGEDRDLSVMANVELKQLFPRKKIGKLTEMNLSANQERTGMEKKRLNWKVEE
GSSSEAKVARGGTVDPAKLVVELAPMEIRTFLVEFNQSFNHYSFDA
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgcatgatgaggctgcaacgcattatatcgatatgatagatcagacgactcta
gggcatcgctttattaaaaaggaatttgacatgactccaagaattggttggcaaattgac
ccctttgggcattcggcagtccaggcttatttgttgggagcagaagcgggattcgactca
cttttctttggtcgaatagattaccaggatagggctaagcgcaaaaatgacaagagcctt
gaatttatttggcagggttcgaagagtctcggttcatctgctcagattttttctggtgca
ttccctgaggcttatgagcctccatctggtttctattttgaagttaatgatgattcccca
attgttcaggatgacatcactttgtttgattacaatgtacatgatcgtgttaatgacttt
gttgctactgcagtatcacaggctaacataactcgaacgaatcatataatgtggaccatg
ggaacagatttcatgtatcagtatgcacacacatggttccgacaaatggacaaactcatt
cactatgtcaacatggatggacgtgttaatgctctgtattctactccatccatatatacg
gatgcaaagtatgctacaaatgaatcatggccaatcaagaccggtgatttctttccttat
gcagatcgtgcaaatgcatactggacagggtacttcacaagtagaccagccttgaaacat
tacgttagaacaatgagtggctattatttggctgcaaggcaactagaattttttatagga
aggactgattcagggcccaacacagattcattggcagatgccttggcaattgctcaacat
catgatgcagtcactggtacagagaagcagcatgttgccaatgattatgcaaaaagattg
gccataggctacacggaggccgagcaagtagttgccacgtcacttgctcacttggttgag
tctgcatcatacactggatctgtaaatccaactacgaagtttcaacagtgcccacttctg
aatatcagctattgccctgcatcagaaatgaatttttctgaagcgaaacaattgattgtc
atggtgtacaattccctaggatggaagagggatgatgtaattcgaattcctattatcaat
gaagatgtcactgttcatgattctgagggaagagaaattgaatcacagcttctcccacta
gatgatgcccatgtgggcttaaggaactactatgctaaggcatacttgggtcaaactcca
acaaagacaccaaactattggcttgcgtttacagtatccgtgccaccactcggtttcaac
acatacactatctcgcttttgggtaaagctcctctgattcctcagaatgccggggcatat
atcttccgtccaaatggcacgtttctcataaaacctggagaaaaggcttctctgactgtc
gtgcgtggaccagtaatagatgaagtgcatcaacaaattaatgcatggatatatcaggtc
accagaattcacaaagagaaggagcatgttgaattcgagtttattgttgggccattacct
actgatgacggaattggcaaagaagttgtaactcaactagccactaccatggctaccaat
aaaacgttctacactgattctaatgggcgtgattttattgaaaggattcgcgactataga
acagattgggacctgaaagtgcaccaacctatagccggaaattattatccaattaatctt
gggatatacatgcaagataacagtacagaattttcggttttggtggatcgatctatagga
gggtccagcacagtggatggacagatagagctgatgctccacaggagactactacttgat
gactcaagaggtgtggcagaggctctaaatgaaactgtctgtattgacaatgtttgcagt
ggactaagaatccaaggaaaattttatttcagaatcgaccccctgggagaaggtgccaag
tggcgtcgcacttttggtcaggagatatattcccctcttttactggccttttctgaacag
gatggagataactggaagaattctcatgtaaccactttttcaggggttggttcctcgtac
agtttacctaataacgtcgctcttataactcttcaggagcttgatgatggaaaagttctc
cttcgattagcacatttatatgagattggagaggacagggatctttctgtaatggcaaat
gtagagttgaagcagctcttccccaggaagaagattggtaaacttacagagatgaactta
tcggcaaatcaagaacggacaggaatggagaaaaagagactcaattggaaggtggaagaa
ggctcttcatcagaagcaaaggttgcgaggggtggaactgttgatcctgcaaaactggtt
gtggaacttgcaccaatggaaatccgaacctttctcgttgagtttaaccaaagcttcaat
cattattcatttgatgcctaa
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