Malus sylvestris (European crab apple): 126610529
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Entry
126610529 CDS
T09027
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
msyl01009
]
126610529
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126610529
03041 Spliceosome [BR:
msyl03041
]
126610529
Protein phosphatases and associated proteins [BR:
msyl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126610529
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
126610529
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126610529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
PHM7_cyt
PCM1_C
RNA_bind
zf_CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
126610529
NCBI-ProteinID:
XP_050134568
LinkDB
All DBs
Position
17:complement(2245116..2250913)
Genome browser
AA seq
941 aa
AA seq
DB search
MSQRSSDFEGSMELKVSSPKPGGLSPSDCSNDPEEKEVSDDDDDDRNHKHRRRDTRSQSS
ERDTFDQVTTRPFRRRNKPFVNGNSFRDNDSQASTPWRNHNSTDFSVKFDKRRPGSASLP
RAPFDLNQRIRANQAFPGDVGPGRGRGRDSGSWSQCGPRFNSDLASQMVHQGSIHPSLFA
GRGLPNVSGAQSGSWNAFGLIPGIPNGSMDTLHSIGLQGTLRPPIHSSLNMGIPRQRCRD
FEERGFCLRGDVCPMEHGMNRIVIEDVQSLSQFNLPVSIPSAHLLGKPTGPGSLPSVSAS
STALMNSKGLHVKTSKTAVTDDGLGLNGSYSGTGYAGGADLYDPDQPLWNNNCPETSNAL
LGMRSPRNDETETLSNDADNEFPIRSVGAAASSQSTSMSVWGRIGSSKSRLDVKEKIDPV
INSSDYIESDTKEVKEAVNTQTPPRQGKRIITEDCPNTMDSSPKTPFDSTRNIRRPSQKA
LRTLFVNGIPQKNNKREALLSHFKKFGEVIDIYIPSNSERAFVQFSRREEAEAALKAPDA
VMGNRFIRLWWANRDSIPDEGIGTPSVFSGTPHGVTTGSVPPHSSGASISKDNLQSAALK
GSIAHASDASLPATDNSKLITSNDPKAPPLQKKLESLEQLKEELRKKQQMLAQKRNDFRR
QLDKLEKQATGPKGETDTEQAAKRPKVGTTTEADKAATPSSSNPAPADAMHAEMTDKNKS
GENILSGSPKTSSPVMLQQSPSLKLQTIRPLGPLGPPSPFNRYKLDNRPTGFIILPPLPV
GFANVAIMKEHFSPYGDLSTVELEDLESRDCGSELEKSKDCSARITFTTRRSAERAFLNG
KCWEGHDLKFTWLTFSISSNDHSGRENSPSTTPKGPLLADAEPVADKEACIVSQEAAASG
NGEPEHSEGISGVEHMESDEHAEPSPRSTSGEKESSQVDAL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacgttctagtgatttcgagggatcaatggagttaaaagtttcatctccaaaa
ccagggggtctttctccttctgattgcagtaatgatcctgaggagaaggaagtaagtgat
gatgatgatgacgatcgaaaccacaagcatcgtagacgagatactcgctctcagtcttcg
gagagagatacttttgatcaagtcacaacaaggccattcagaaggcgaaacaaacctttt
gtaaatgggaactcttttagagataatgactctcaagcaagtacaccatggagaaatcac
aattccactgacttttctgtaaaatttgataaaagacgcccggggtcagcatcactgcct
cgagcaccttttgatttaaatcaaagaatccgggcaaaccaagcatttcctggagatgtt
ggtcctggtaggggaagaggacgggactctggatcatggagccaatgcggtcctaggttc
aactcagatcttgcttctcaaatggttcatcagggctccatccatccgagtctttttgct
gggcgtggattgccaaatgtttcaggtgcacaaagtggatcctggaatgcatttgggttg
attccaggaataccaaatggttccatggacacactacattccattggcttgcaaggaaca
ctcagaccaccaatccattcttcattaaatatggggattcctcgccaaagatgtagagac
ttcgaggagcgtggattttgtctcagaggggatgtgtgcccaatggagcatggtatgaat
cggattgttattgaagatgtccagagtctttcccagttcaacctccctgtgtcgattcca
agtgcacacttactgggaaaacccacaggcccgggatctctaccatcagtgagtgcatcc
tcaactgcattgatgaatagcaaaggcttacatgtaaaaacaagcaagactgctgtcact
gatgatggcttgggcttgaatggttcatattctggtactggttatgcaggtggtgctgat
ttgtatgaccctgatcaacccctgtggaataataactgtcctgaaacctcaaatgcactt
ctaggcatgcgatcacccaggaatgatgaaactgaaaccttgtcgaatgatgctgataat
gaattcccaattagaagcgttggggcagctgccagttcacagagtacaagcatgtccgtg
tggggtagaattggtagttcaaaaagtagattagatgtgaaagagaaaattgatcctgta
ataaattcttcagattatattgagagtgatactaaggaagttaaggaggcagtcaacact
caaactccaccacgtcaaggaaagcgtataattacagaggattgcccaaacaccatggat
tcatcacccaagacaccttttgattccacgcgtaacattcggagaccatctcaaaaagca
ctgcgtactctatttgtcaatggcattcctcagaaaaacaacaaaagggaggctcttctt
tctcattttaaaaaatttggagaggtcattgacatctacattccatcaaatagtgaacga
gcttttgtccagttttcaaggagggaagaggctgaagctgctttaaaggcacctgatgct
gtaatgggtaaccgatttatcaggttgtggtgggctaatcgtgatagcattcctgatgag
gggataggcactcccagtgttttttctggaactccccatggtgtaacaactggttcagta
ccaccccattcatctggtgctagtattagcaaggataatcttcagtctgcagctctaaag
ggtagtattgcccatgcatctgatgcttctctacctgccactgataactccaagcttatc
acctcaaatgatcccaaggccccacctctgcagaaaaagctagagagtttggagcagttg
aaggaggaacttcgcaagaagcagcaaatgttagcccagaaaaggaatgactttcgtcgc
cagttggacaagcttgagaaacaagctactggacccaagggtgagacagacacagagcaa
gctgctaagagacccaaagtgggaacaacaaccgaagctgataaagctgctactccaagc
tcctcaaatcctgctcctgcggatgcaatgcatgctgagatgactgataagaacaaatca
ggggagaacattttgtccggtagtccaaaaaccagttcacctgtgatgctgcagcaatct
cctagcttgaagctgcagactatccgtcctttgggaccactggggccaccttctcctttc
aatagatataaattagacaaccgtcctactggttttataattcttcctcctttaccagtt
ggatttgcaaatgttgctattatgaaggaacacttttcaccctatggcgatctttctact
gtggaattagaagatctggaatcccgtgattgtggtagtgagttagagaaatcaaaggat
tgctcagctcgtataactttcactacacgccgttcagcagagagggcatttctcaacggt
aaatgctgggaagggcatgatctgaaatttacgtggctgacatttagtatttccagcaat
gaccatagtggcagagaaaactctccatctaccactcctaaggggccactactagctgat
gctgagcctgttgcagataaggaagcatgcattgtttcccaggaagctgctgcatcagga
aatggagaaccggaacattctgaaggaataagtggtgttgagcacatggaatcggatgaa
catgccgagcctagtccaagatcaacatcaggcgagaaagagtcatcccaagtcgacgca
ttgtaa
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