KEGG   Malus sylvestris (European crab apple): 126610600
Entry
126610600         CDS       T09027                                 
Name
(RefSeq) DNA repair protein UVH3
  KO
K10846  DNA excision repair protein ERCC-5
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    126610600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126610600
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     126610600
SSDB
Motif
Pfam: XPG_N XPG_I UBM XPG_I_2
Other DBs
NCBI-GeneID: 126610600
NCBI-ProteinID: XP_050134655
LinkDB
Position
17:2769217..2777935
AA seq 1654 aa
MGVHGLWELLAPVGRRVSVETLAGRRLAIDASIWMIQFMKAMRDEKGEMVRNAHLLGFFR
RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQSKLRKTAEKLLLNHLKVMRLK
DLAADIKNQRQKNDAEGKEGLTNQTGRMADNSFEEDDLGLLSSNQEKLDEMLAASIQAEE
EGGFIKNASQSTAAEDGEEDDEEMILPEMDGEVDPAVLASLPSSMQHRLLLQKNKEENDA
KGKKILSDETEMLGINSENFDTVSRSCNQEMIDEMIAASIAAEKDAGVTNNASTSTASIL
VGDDIYEDDDADEEMILPALHGEVDPAVLAALPPSMQLNLLVQIRERLMAENRQKYQKVK
KDPEKFSELQIQSYLKTVAFRREIDQVQKAASGRGVSGVQSSRIASEAHREFIFSSSFTG
DKQVLASARADRNGEKQQAPKECPSKFRNSASSTSNVTGSAPDESTSVFDDNIETYLDER
GHLRVSRVRAMGMRMTRDLQRNLDLMKEIEREKTIANKTTDTRDMLNENSIDILKSSRRY
RTVTEIPRGDNGDSVDTGGVRKHPGQNKVDSSLGDNNSNDRNNQSMLKLETPIEISIEDN
GESKSFDGDHDFFASLVAGNPVTIDANDILKKHFSGSDSDCDWEEGIVEAKGSSFPNDSE
VKSKVPGDINDDSEVEWEEGVCGSAENTSSVPGEHGKTNSKGYFEEEASLQEAIRRSLED
MGSDKGNYGSPADEKLQCFGGEAHKGAECIDREIKIVEPVLLGKIGTQQNESSCDIGDGV
KKTNLGSPPAQAMQNVSEKENFCGGVQCTASITPSATKEVHVITEQVLGTFHGDGGLSTF
PENIEKNNAYSSDALSGDATGWVDDQKTEVEAESSCHLVEMANSESLTKKITNDSDADKK
WGKEKSHDICFQESEHSWDISSLKGDENARMEATEADLEEEMLILDQECMDLGDERRRLE
RNVESVSSEMFTECQELLQIFGIPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA
RSVYKNIFDDRKYVETYFMKDVENELGLSREKLIRMALLLGSDYTEGVSGIGIVNAMEVV
NAFPEEDGLHKFRDWIESPDPTILGTFDGEIGSNAKKRGSKFGDKDINTKSGMEEVSEQN
SCHGQEHQQSADLIEETKQTFMDKHRKVSKNWHIPPTFPSEAVTSAYICPQVDKSTEPFT
WGKPDHFFLRKLCSEKFGWASQKADELLIPVLNEYNKRETQLRLEAFYTFNERFAKIRSK
RIKKAVKGIAGNQSSELVDDAAHKVSRSRKKRTTSTDEAGNNKSEKLSEGTDKSVLKKQS
DSKGKSTAKQSRKRRTTEEPAPSKRPKPAEAGRSTNRKLHANGNERGRGRRVLGSGKEKV
NPNFEVSETSSGNGDDDNDGMDLHTDTIEGLGEMRRSGRLRKPVNYTVDDLDVDDLGEPL
DHSNAKCSNAETGEQVISRDEGKCEESASSLSEKKQQNEGNLSPNVGLHKDYLETGGGFC
PVEDETGEPGLSQHGDPSFGAEVSEDYLKTGGGFCGDESETGNDQDGIRVQTKTTASENS
DLPSFSGIVNMVDLGHISSQSSIGNKRPLVGFQSSERTDAYDTEQNINHETATITDDQTK
VNASLPENSVDNSRQPSGGALSAMPFLRKKRRKT
NT seq 4965 nt   +upstreamnt  +downstreamnt
atgggagtccacggtctctgggaactactggcccccgtcggccgccgcgtctctgtcgaa
actctagccggaagaagactcgcaatcgatgcgagcatatggatgatacagttcatgaag
gcaatgcgggacgagaagggagagatggtccgcaacgcgcatttgctcggcttcttccgc
cgaatttgcaagctgctgtacctgcggaccaagccggtgtttgtgtttgacggcggaacc
ccggccctcaagcgccggactgtgatcgctcggagaagacaacgggagaacgcccagtcc
aagcttcgcaagaccgccgagaaattgcttcttaatcatcttaaggtgatgaggctgaaa
gacttggctgcggatatcaagaaccagaggcagaagaatgatgccgagggtaaagaaggt
ctaacaaatcagaccggtaggatggcggataatagttttgaagaagacgacttgggtttg
ctgagtagcaaccaggaaaagctggatgaaatgttggcagcatccatccaggccgaggaa
gaagggggttttataaagaatgcatcacaatctactgctgctgaggatggtgaagaagat
gatgaagagatgatactaccagagatggatggtgaagttgatccagctgtattagctagt
ttgccttcatcaatgcaacatagacttcttttgcagaaaaataaggaggaaaatgatgct
aagggtaagaagattttgtcagatgaaactgagatgttgggtatcaattcagaaaacttc
gacacagtctcaaggagttgcaatcaagagatgatagatgaaatgattgctgcgtctatt
gcggcagagaaggatgctggtgtaactaataatgcgtcaacatcaactgcttctattctt
gtgggggacgatatctatgaagatgacgatgccgatgaagagatgatattgcctgcactg
catggtgaagttgatccagctgtattagctgcattgcccccatcaatgcaactcaatctt
cttgttcaaattagagagaggttgatggcggaaaacagacagaagtatcagaaagtcaaa
aaggaccctgaaaagttctctgagctgcaaatacaatcctatcttaaaactgttgctttt
cgtcgcgagatagatcaagtacagaaagctgcctctgggagaggggttagtggtgtgcag
agttcacgaatagcctctgaagcccacagagaatttatcttttcttcatcatttactggt
gataaacaagtacttgcatctgcaagagctgatagaaatggagaaaagcaacaagcaccc
aaagagtgtccttcaaaattcaggaacagtgcttcgtctaccagtaatgtgactggatca
gctccagatgaatccacaagtgtttttgatgacaacattgagacatatttggatgagagg
ggccatcttcgagtcagtagagtgagagctatggggatgcgtatgacccgtgatttacag
aggaacttggatttgatgaaggagattgaacgggagaaaacaattgcaaacaagacgact
gacactagggatatgctcaacgaaaatagcattgacattttgaaaagttcacgtagatat
agaacagtcacagaaataccaagaggtgataatggtgattctgttgatactggaggggtg
agaaagcatcctggtcagaacaaggttgactcctcacttggtgataataactcaaatgac
agaaataatcagtctatgttaaaacttgaaactcctatagaaatatctattgaagacaat
ggcgagagcaagtcatttgatggtgatcatgatttttttgcttcgttagtagcaggaaat
cctgtaactattgatgctaatgatatattaaaaaagcatttttctgggtctgactcagac
tgtgactgggaggaagggattgttgaagcaaaaggtagcagttttcctaatgactctgaa
gttaaaagtaaggtgccaggcgatattaatgatgacagtgaagtggaatgggaggaagga
gtttgtggtagtgctgaaaatacctcatctgttcctggtgagcatggaaaaacaaattct
aaaggttatttcgaagaagaggctagtttgcaggaggcaatacggagaagtcttgaggat
atggggagtgacaagggtaattatggatcacctgctgatgaaaagttgcaatgttttgga
ggagaggctcataaaggtgctgaatgtattgatagagaaattaagatagttgaaccagtt
ttgttggggaagattggtactcaacaaaatgaatcatcctgtgacattggtgatggagtc
aaaaagacgaacttgggttctcctccagcacaagcaatgcagaatgtaagtgaaaaggaa
aatttctgtggaggagtgcaatgcacagcatctattactccgtcagcgacaaaggaggtc
catgtgattactgaacaagtattgggtactttccatggtgatggtggtttatccaccttt
cccgagaacattgaaaaaaataatgcttattcttcggatgccttgtcaggtgatgctact
ggttgggttgatgatcagaagactgaagttgaagctgagtcatcttgtcatttagttgag
atggctaactctgagtcattgacaaaaaagataacaaatgacagtgatgctgacaaaaaa
tggggcaaggaaaagagccatgacatttgttttcaggaaagtgagcacagttgggacata
tcttctctcaagggtgatgagaatgcacgtatggaagccacagaggctgatttggaggag
gaaatgctaattctagaccaagaatgtatggatctgggtgatgagcgaagaaggcttgaa
cgtaacgtagaatctgtcagcagtgaaatgttcaccgaatgtcaggagctactgcaaatt
tttggtataccatacattattgcaccaatggaagcagaagcccagtgtgcgtatatggaa
cttgccaaccttgttgatggtgtggtaactgatgattctgatgtgttcttgtttggggca
cgaagtgtttacaaaaatatattcgacgatcggaagtatgttgagacatatttcatgaag
gatgttgagaatgagcttggcctaagcagagagaaattaattcgtatggcacttcttctt
ggaagtgattatactgaaggagttagtgggatcggcattgtcaatgctatggaagttgta
aatgcatttcctgaggaggatggcctccataaattccgggattggattgaatcaccagat
cctaccattctagggacgtttgatggagaaataggatctaatgcaaagaaaagggggtct
aaatttggagataaggatatcaatacgaagagcggtatggaagaagtctctgagcaaaat
agttgtcacggacaagagcaccagcagtcagctgatcttattgaagaaacaaagcaaact
ttcatggataagcatagaaaagtgagcaaaaattggcatattccccccactttcccaagt
gaagcagtgacttctgcttatatttgtccacaggtggacaaatcaactgaacccttcaca
tggggaaagccagatcatttttttcttcgcaaattatgttcggaaaagtttggctgggct
agccagaaggcagatgaattgctaatacctgttctgaacgagtacaacaaacgcgagact
caactgcggctggaagctttttacacttttaatgaaagatttgcaaaaattcgtagtaag
agaatcaagaaagctgtaaaaggaattgcaggaaatcaatcttcagagttggtggatgat
gctgcacataaagtttcaagaagcagaaagaagagaaccacaagtactgatgaagctggg
aataacaaatcagagaaactgtcagagggaacagataaaagtgttcttaagaagcagagc
gattctaagggaaaatcaacagctaagcagtcgaggaaaaggaggaccactgaagagcct
gctccatctaagcgaccaaagcctgctgaagctggacgatcaaccaatagaaaattgcat
gcgaatggaaacgaaagaggaagaggcaggagggtattaggaagtggaaaggaaaaggta
aatcccaattttgaagtatctgaaaccagctctggcaatggtgatgacgataatgatggg
atggaccttcataccgatacaatagaagggttgggagaaatgcgcaggtctgggcgtctg
cggaagcctgtaaattacacagtcgatgacttagacgttgatgatcttggtgagccacta
gatcacagtaatgcaaaatgctccaatgcagagacaggggaacaagttatatctcgggat
gaaggaaaatgtgaagaaagtgcttcttctctcagcgaaaagaaacagcagaatgaaggg
aacttgtctcccaatgtgggcctgcataaagattatcttgaaacaggaggtgggttctgc
ccggttgaagatgaaactggtgaaccaggtttaagccaacatggtgatccttctttcggg
gctgaggtttctgaagactaccttaagacaggaggggggttttgcggagatgaaagtgag
actggtaatgaccaagatggaattcgtgttcaaacgaaaacaacagcttcagagaattct
gatcttcccagtttctctggcattgtcaacatggttgatcttggtcatatttcatctcaa
tccagcatcggcaacaaaagaccattagtcggatttcaaagtagtgagaggacagatgcc
tatgataccgaacagaatataaatcatgagactgctacaattaccgatgatcaaacgaag
gtcaatgcgtcattgccggaaaatagcgtggataattctcggcagccatccgggggagct
ctgagtgcaatgcctttcctgaggaaaaaaaggaggaagacctga

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