Malus sylvestris (European crab apple): 126610651
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Entry
126610651 CDS
T09027
Name
(RefSeq) protein transport protein SEC13 homolog B
KO
K14004
protein transport protein SEC13
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126610651
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126610651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126610651
04131 Membrane trafficking [BR:
msyl04131
]
126610651
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126610651
Membrane trafficking [BR:
msyl04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
126610651
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
126610651
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
126610651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
126610651
NCBI-ProteinID:
XP_050134714
LinkDB
All DBs
Position
17:3032053..3033849
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AA seq
300 aa
AA seq
DB search
MPAQKIETGHQDTVHDVAMDYYGKRLATASSDATIKIIGVGNASQHLATLSAHRGPVWEV
AWAHPKFGSILASCSYDGQVIIWKEGNPNEWQQAHVFNDHKSSVNSIAWAPHELGLSLAC
GSSDGNISVFTARADGGWDTTKIEQAHPVGVTSVSWAPSMAPGALVGSGLLDPVHKLASG
GCDNTVKVWKLYNGIWKMDCFPALQMHSDWVRDVAWAPNLGLPKSTIASASQDGTVVIWT
VAKEGEQWEGKVLKDFKTPVWRVSWSLTGNLLAVADGNNNVTLWKESVDGEWQQVSTVEP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccagaagatcgaaacgggtcaccaggacactgtccacgatgtagccatggat
tactatggaaagcgtctagcaacagcttcgtctgatgccaccattaagataattggtgtc
ggaaacgcttcacagcaccttgctacattgtcagctcatagaggccctgtttgggaggta
gcttgggcgcatcccaagtttgggtcgattcttgcttcttgttcatatgatgggcaggtg
atcatttggaaggagggaaatcccaatgagtggcaacaggctcatgtttttaacgaccac
aagtcatcggtaaattccattgcttgggcacctcatgaacttggtctgagcttagcttgc
ggttcttctgatgggaatatttcggttttcactgccagggccgatggtggttgggacacc
actaagatagagcaagcccaccctgttggagtaacctcagtttcatgggcgccatcgatg
gctcctggtgctctagttggatctggtctgcttgatccagttcataagctggcatccggt
gggtgtgataatactgtgaaggtgtggaagctgtacaatgggatctggaagatggactgc
ttccctgcccttcaaatgcacagcgattgggtgagagatgtagcatgggcacccaacttg
ggacttccaaagtccacaatcgcaagtgcttcacaggacggaacagtggtgatttggact
gtggccaaggaaggtgagcaatgggaggggaaggttttaaaggattttaagaccccggtc
tggagggtgtcatggtctctaaccggaaacttgctggctgtggctgatggaaataacaat
gtaacattgtggaaagaatctgtcgacggtgagtggcaacaagtaagcacagttgagcca
tag
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integrated database retrieval system
