Malus sylvestris (European crab apple): 126610681
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Entry
126610681 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP107-like
KO
K14301
nuclear pore complex protein Nup107
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126610681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126610681
03036 Chromosome and associated proteins [BR:
msyl03036
]
126610681
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126610681
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126610681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
DUF1570
Motif
Other DBs
NCBI-GeneID:
126610681
NCBI-ProteinID:
XP_050134743
LinkDB
All DBs
Position
17:13468930..13487631
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AA seq
1078 aa
AA seq
DB search
MDVEMDASPSFFDPEDLTIREKFRRYGKRHLTSSMSPHQENSASKYSESRLLYDGQNLHS
PTNAALLLENIKQEVESIDADHLERTSFLRRRSPIDGTDMDDGAGSVHHSIKLFKNEEHS
LADDGDPTFSLFASLLDSALQGLMPFPDLILRFEESCRNVSESIRYGSNIRHRVVEDKLM
RQKAQLLLDEAASWSLLWYLYGKGTEEIPKEFILLPSTSHLEACQFVVEDHTAQLCLRIV
QWLEGLASKALDLERKVRGSHVGACLPSSGIWYHTQCYLKKGASSTNTVHHLDFDAPTRE
HAQLLPDDKKQDESLLEDVWTLLRAGRREEACHLCRSAGQPWRAATLCIFGGIDEFPSVE
AVVKNGKKRTLQAIELESGIGHQWHLWKWASYCASEKIAEQDAGKYEAAVYAAQCSNLRR
MLPICTDWESACWAMAKSWLHVQVDLELAHLEPGRMDQFKSIGDAIDGSPGHIDGAVQPS
NGPGIWPLQVLNQQPRQLSDLLQKLQSGELVHESVTRGCKEQQRQIEMKLMLGDISQLLD
LIWSWIAPSEDDQSCFRPHGDPQMIRFGAHLVLVLRYLLDDENKDTLREKIMNVGDLIVH
MYAMFLFSKQHEELVGIYASQLARHRCIDLFVHMMELRLNSSVHVKYKIFLSAMGYLQFS
PVDNSKGSFEEIVERVLSRSREMKVGKYDKLSDVAEQHRLQSLPKAMVVQWLCFTPPSTV
TNVEDVSTKLLLRALIHSNILFREFALVSMWRVPAMPIGAHTLLSFLAEPLKQLSESSDT
LETYNVSQNLKEFHDWSEYYSCDAKYRNWLKIELENAEVSPLELSMEEKQRTVSAANETL
NSSLSLLLRTENPCLASAQDHLYESVEPIFLELHATAMLCLPSGECLPPDATVCTTLMSA
LYSSVSEEDVLHRQLMINVTVPSKDNYCVEVVLRCLAVAGDGLGPQEHTDGGLLGTVMAA
GFKGELLRFQAGVTIEISRLDAWYSSKEGSLESPATYIVRGLCRRCCIPEVILRCMQVSL
SLIELGVPPESHDQLIELVASSEAGVLHLFSHQQLQEFLLFEREYSISQMELEEELSS
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggacgtagaaatggacgcttctccaagcttcttcgaccccgaggacctcacaatcaga
gagaagtttcgtcgatacgggaaaaggcacttgacttcaagcatgtcgccccaccaagag
aattcagcttctaaatacagtgaatctaggctactatacgacgggcagaatttacatagc
ccgaccaatgctgcacttcttctcgaaaatattaaacaagaagttgaaagcattgatgct
gatcacttggaaagaacttctttcttaagaaggaggtcgcccattgatggcacagatatg
gatgatggtgctgggtcagtccaccattcaatcaaacttttcaagaatgaggagcattca
ctggctgatgatggagatccaacctttagcctttttgcatctctacttgattctgctctt
caagggttgatgccttttcctgacctgatactaagatttgaagaatcctgccgaaatgtt
tcagagtcgattaggtatggttccaacataaggcatcgtgttgtagaggacaagttgatg
aggcagaaggctcaactcctgcttgatgaggctgcttcttggtcccttttgtggtacctt
tatgggaaagggactgaagagatccctaaagagttcatcttgttgccctcaacatcacat
ttggaggcttgccaatttgtcgtagaggaccatacagcacaattatgtctacgcattgtt
caatggctagaaggcttagcctccaaagcacttgacttggaaagaaaggtgcgggggtct
catgttggcgcctgtctcccaagctctggaatttggtatcatactcaatgctatcttaag
aaaggagcctccagtacaaataccgttcatcacctggattttgatgctccaacacgtgaa
catgctcaacttctacctgatgacaaaaaacaagatgaatctctgttggaagatgtctgg
actcttttaagagctggaagacgggaagaggcatgtcacctttgccggtctgcgggacag
ccatggagagctgcaactttgtgcatatttggaggaattgatgagtttccgtcagttgaa
gctgtggtgaaaaatggaaagaagagaactttgcaagccattgagttagaaagtggcatt
ggccaccaatggcatctgtggaaatgggcatcatattgtgcatcggagaaaatagctgag
caagatgctgggaaatatgaagcagcagtgtatgcagcacaatgtagtaatttaaggcgc
atgcttccaatctgcaccgactgggagtcagcatgctgggctatggcaaaatcatggtta
catgttcaggtggatttggaattggctcatttggaaccaggaagaatggatcaatttaaa
agcattggagatgcaattgatggaagtcctggacatattgacggagctgttcagccttca
aatggaccaggaatttggccgctccaagttttgaaccaacaaccacgacaactttcagat
ctactccagaaacttcaatcaggggaattagttcatgaaagtgttactcgaggatgcaag
gagcagcaacgtcaaattgagatgaaactaatgctaggagatatctcacaattgctggac
cttatatggtcatggatagccccttcagaagatgatcagagttgcttcaggccccatgga
gatcctcagatgattcgatttggtgctcatctagtgcttgtgcttagatatttacttgat
gatgaaaataaggatactttgagagagaagattatgaatgttggtgatctcattgtacac
atgtatgccatgtttctgttttccaagcaacacgaggagttggtgggtatatatgcttct
caacttgcacgccaccgttgcattgacctctttgtgcacatgatggaactgaggctaaac
agcagtgtgcatgtcaaatataagatcttcctttctgctatggggtatttacaattttct
cccgtggacaactcaaaaggaagttttgaagaaattgttgagagggttctgtcaagatct
cgggaaatgaaagttggcaagtatgataagttatcagatgttgcagagcagcaccggctg
cagagccttccgaaagctatggttgtccagtggctatgctttacacccccctcaacagtt
accaatgttgaggatgtcagtacaaaacttcttctacgagctttgatacacagcaacata
ttgttccgggagtttgccctggtttcaatgtggagagttcctgcaatgcccattggtgct
cacacattacttagtttccttgctgaacctttaaaacaactttcagaatcttctgatacc
ttggagacttacaacgtgtctcagaatctcaaagagttccacgattggagtgagtattat
tcttgtgatgcaaaatatcgcaactggctcaaaattgaattagagaatgcagaggtttct
cctcttgaactctcaatggaggaaaaacaaaggaccgtttcagcagccaatgagactctg
aattcatctctgtcattgttactgagaactgaaaatccttgtttagcttcagctcaagat
catttgtacgaatctgtggaacctatatttcttgaattgcacgccaccgcaatgctttgc
ttgccatctggtgaatgtctgcctccagatgcaaccgtgtgcactacattgatgagtgct
ctgtactcttcagtgagcgaggaagatgtgttgcataggcaactaatgataaatgtcacc
gtaccctcaaaggacaattactgtgtagaggttgtgcttcgctgcttggcagtggcaggt
gatggtcttgggccacaggaacacactgatgggggtcttcttggtactgttatggctgct
ggcttcaaaggtgagttgcttcgttttcaagctggagttaccattgagatttcccgatta
gatgcttggtattcgagcaaagaaggttccctagagagcccagcaacgtacattgtgcgg
ggcctttgtcgtaggtgctgtattccagaagtcattcttcgatgcatgcaggtctctctt
tcgcttatagagttgggtgttccacctgaaagccatgatcagttgatcgaattagttgct
agctctgaagctggggtccttcatttgtttagtcaccaacaattgcaagaatttttgttg
tttgagagggaatactccataagccaaatggagcttgaagaggagctttcttcttga
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