Malus sylvestris (European crab apple): 126610721
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Entry
126610721 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126610721
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
msyl03016
]
126610721
Enzymes [BR:
msyl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
126610721
Transfer RNA biogenesis [BR:
msyl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126610721
Prokaryotic type
126610721
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
NurA
Motif
Other DBs
NCBI-GeneID:
126610721
NCBI-ProteinID:
XP_050134792
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Position
17:complement(1374289..1377675)
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AA seq
530 aa
AA seq
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MAKPVSLSLLFLRPTLTLSRLLRPHPNLRTVLCRSWSPKTPSFSTTSTPYPLQYDMIVNR
PTQSSLDHNRRRPARVSRPDSETSLESEPDLPEKPTSASELGFENWLDEKLASAEMDKSK
RKYYNKRRKRMYGTDSEEEDRRREEEESLVELKPEVVEFNTLHKREEELYFYDTFAYPWE
KEKHYKMVYQLEKKYYPDQCLEKAFLEPGESNSGVNSGGNLKGKAKPKKTKDGEGDKGLV
FFEQAEREEKKEREFVKNVSSKDVTEKKVEDFFKCLKKVPNEDAGSGDGNGEPYLLTRNT
ELPPRWDGPYGTVVLVNKPKGWTSFTVCGKLRRLVKVKKVGHAGTLDPMATGLLIVCVGK
ATKLVDGYQGMIKGYSGVFRLGEATSTWDADSPVIQREPWEHIKDEDIKKAVASFSGEIW
QVPPMFSAIKVGGEKMYEKARRGESIELSPRRISIFQFDIERSLDDRQNLIFRVICSKGT
YIRSLCADLGKALGSCAHLTALRRDSIGEYSADNAWDFKELEEAITKTYF
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggctaagccagtctctctgtctctcctcttcctccgtcccacactcacactctctcgc
ttactgcgaccgcaccccaacctccgcaccgtactctgccgatcatggtcccccaaaacg
ccgtcgttctcaaccacctccactccctacccacttcagtacgacatgatcgtcaaccgc
ccaactcagtcctccctcgaccacaatcgccgccgacccgccagagtcagcagaccggac
tccgaaacctccctcgagtccgagcccgacttaccggaaaaacccacctcggcgtcggaa
ttggggttcgagaactggctcgacgagaagctggcgtcggcggagatggacaagtcgaag
cgaaagtactacaataagaggaggaagaggatgtacgggacggattcggaggaggaggac
cggcggcgggaggaggaggagagcttggtggagctcaagccggaggtggttgaattcaac
acgctgcataagagggaggaggaattgtacttttacgacacgtttgcgtatccatgggag
aaggagaagcattacaagatggtgtaccagctggagaagaagtactatcctgaccagtgt
ctcgaaaaggcgtttcttgaaccaggggagtcaaattccggtgtcaatagcggtggcaat
ttgaaggggaaggcaaagccgaagaaaacgaaagacggggaaggtgataagggattggtg
ttctttgagcaggcggagagagaggagaagaaggagagagaattcgtgaagaatgtgagt
agtaaagatgtgacagagaagaaggtggaggacttctttaagtgtttgaagaaagtcccc
aatgaagatgctggcagtggcgatggtaatggggagccatatcttttaacaaggaatact
gagcttcctccgagatgggacggtccttatggaactgtggttttggtgaacaaaccgaaa
ggatggacttcttttacagtgtgcggaaagctgcgtcgcctggtgaaagtgaaaaaggta
gggcatgctggaactcttgatcctatggcaactggtttgttaattgtttgtgttggtaaa
gccactaagttggtagacggataccaaggtatgatcaaggggtacagtggagtttttcgt
ttgggggaggctacatcaacttgggatgctgattcaccggtcattcagcgagagccctgg
gagcatatcaaagatgaagacataaagaaagctgttgcatccttttctggggagatttgg
caagtacctcccatgttttcggccatcaaagttggaggtgaaaagatgtatgagaaagca
agaagaggagaaagcattgagctctcacctagacgtatatcaatcttccagtttgacatt
gagcgcagcttagatgacagacaaaatttaatcttccgggttatttgctccaaagggaca
tatatacggtcgctatgtgcagacctggggaaggctctcggaagctgtgcccatttaact
gctcttcgtagagattcaatcggggaatactctgcagacaatgcatgggacttcaaagag
ctggaagaggcaattaccaaaacttatttctaa
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