Malus sylvestris (European crab apple): 126610811
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Entry
126610811 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126610811
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126610811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126610811
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
126610811
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126610811
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Alpha_L_fucos
Motif
Other DBs
NCBI-GeneID:
126610811
NCBI-ProteinID:
XP_050134907
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All DBs
Position
2:35121436..35124123
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AA seq
280 aa
AA seq
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MKTHKVSNSNKFSETRRIEKRGMKRKALERCSRLNSSKDILEVKGLIEQDSNEDSMLQLP
GIPLAPSGQNMNPGVTFVLEKASLVPAYIGKKYQILNPEIHGDFLRKKNMDPYKYRPDIV
HEALLQIMDSRLCMAGILQPVYVKTDEGVLIKVEPHARIPESLDKFCAMMSQLLQKLRIK
AKGRRDTLLRVVQNPLSQHLPANSVKIGLSVSSQKTVQLREYVNAVSNNANLVFVVGAMA
HGKIDSEYADDFISVSGYPLSAGVCLRSICIALERKWNIM
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccataaagtttcgaattcgaacaagttctctgaaacaaggaggatcgaaaag
aggggaatgaagagaaaggccttagagcgatgctcaaggcttaattcttccaaggacatc
ttggaagtcaaaggacttattgaacaggatagtaatgaagattctatgctccaacttccc
ggcattcctctagctccttccggccagaatatgaaccctggagttacttttgttctcgaa
aaggcctccttggtgcctgcttatatcggcaagaagtaccagattttaaatccggaaata
cacggggacttccttcgtaaaaagaatatggatccttataaatacagacctgacattgtt
cacgaggccctgcttcaaattatggattcccgactttgcatggccggcatactgcagccg
gtgtatgttaaaactgatgaaggggttctcatcaaagtcgaaccgcatgctcgtatacca
gaatcattggacaagttttgtgctatgatgtcacaactattgcaaaagctccgcattaaa
gccaagggtcgacgtgatacactattgcgtgtggttcaaaaccccttatctcagcattta
cctgccaactctgtcaaaataggcctttctgtcagttcgcaaaagacagttcagttacgg
gagtatgtaaatgctgtcagcaataatgccaatcttgtttttgtggttggtgcgatggct
cacgggaaaattgatagcgagtatgcggatgacttcatatcagtttctggatatccgctg
agcgctggggtgtgcctgagaagtatatgtatagcattggagagaaagtggaatattatg
tga
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