Malus sylvestris (European crab apple): 126610824
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Entry
126610824 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126610824
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126610824
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
msyl03009
]
126610824
Enzymes [BR:
msyl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
126610824
Ribosome biogenesis [BR:
msyl03009
]
Eukaryotic type
90S particles
Other 90S particles
126610824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
126610824
NCBI-ProteinID:
XP_050134917
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All DBs
Position
2:35125087..35128025
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AA seq
265 aa
AA seq
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MARRKRRQSQSESEAEAQDLSNKTVKRKLEEKSTATEELTDNDVTHDAIIPSPPPNVEVR
RATFIVENASLRKGIVRKRWKILDSEEDADALKQKKDENNYRPGVVYQALRAIFDSKLNK
AGMVGAVYVKTDNGVLFEIKPHVRIPRTCRRFCGVMLELLDKKCIRTKDTNEILMRVIAE
PVTRYLPVNSRVVGLSYSSEKVVDIDDYVNSASDELNLVFVVGELAHGKINEYTDDFISV
SNYPLSAKGCIGLICESLEHKWKIF
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggcggaagaggaggcagtcgcagtcggagtcggaggcggaggcgcaggattta
tctaataagactgtgaagcggaagttggaagaaaaatcgacagcaacagaagagttaaca
gataatgacgtcacgcatgatgccattataccgtccccgccgccgaatgttgaggtgcgt
cgggcaacctttattgtagaaaatgcttctctgagaaagggcatcgttcgaaagaggtgg
aagattctggattcagaggaagacgctgatgccctgaaacaaaagaaagatgagaataat
tatcggcctggagttgtctaccaggctcttcgtgcgatttttgatagcaaacttaataaa
gctggtatggtaggagctgtgtatgtgaaaacagataatggagtgttatttgagattaaa
ccccatgttcgtataccaagaacgtgtaggcgcttttgtggagtcatgctggagttacta
gataaaaaatgcatacggaccaaagatacaaatgaaattcttatgcgtgtcattgcggaa
cctgtaactcgatatttaccggtcaactctcgtgtagtaggactctcttatagttcagaa
aaagtggttgatattgatgactatgttaattctgccagcgatgaattgaatcttgttttt
gtggtgggtgaactggcccatgggaagatcaatgagtatacagatgattttatatcggtt
tcaaattatccattgagtgcaaaaggctgcatagggttgatttgcgagtcgttggagcat
aaatggaagatcttctga
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