Malus sylvestris (European crab apple): 126610827 Help Entry 126610827         CDS       T09027                                  Name (RefSeq) vacuolar sorting protein 18-like   KO K20181   vacuolar protein sorting-associated protein 18 Organism msyl  Malus sylvestris (European crab apple) Pathway msyl04148   Efferocytosis Brite KEGG Orthology (KO) [BR:msyl00001]  09140 Cellular Processes   09141 Transport and catabolism    04148 Efferocytosis     126610827  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:msyl04131]     126610827 Membrane trafficking [BR:msyl04131]  Endosome - Lysosome transport   Tethering complex    CORVET complex     126610827    Hops complex     126610827 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Pep3_Vps18 Clathrin zf-RING_Vps41 zf-RING_11 zf_RING_Vps8 zf-rbx1 zf-RING_UBOX zf_RING_Vps8_fungal zf-C3HC4 zf-C3HC4_2 RPN1_RPN2_N zf-RING_2 Nup54_57_C zf-ANAPC11 zf-RING_5 Motif Other DBs NCBI-GeneID:  126610827 NCBI-ProteinID:  XP_050134925 LinkDB All DBs Position 17:7086484..7095181 Genome browser AA seq 987 aa AA seqDB search MDSGRQVFTVDLLERYAAKGRGNITCMAAGNDVILLGTSKGWIIRHDFGVGDSFDIDLSV GRPGEQSIHRVFVDPGGSHCIATIVGSGGADTFYTHAKWTKPRLLTKLKGLVMNAVAWNR QQITEASTKEVILGTDNGQLYEMAVDEKDKKEKYVKFLFELLELPEAFMSLQMETATILS GTRYYVMAVTPTRLYSFTGIGSLETVFASYSEQTVHFMELPGEIPNSELHFYIKQRRAIH FAWLSGAGIYHGGLNFGAQHSSPDGDENFVENKALLNYSTLSGGSEAVKPSSMAVSEFHF LLLIGNRVKVVNRISEQTIEELQFEQTPEAVSRGVTGLCSDATAGLFYAYDQNSVFQVSV NDEGRDMWKVYLDMKEYAAALANCRDPLQRDQVYLVQAEAAFSAKDYLRAASFYAKINYI LSFEEITLKFITVNEQDALRTFLLWKLDSLAVDDKCQVTMISTWATELYLDKINRLLLED DTAVDNRNSEYHLIIKEFRAFLSDSKDVLDEATTMRLLESYGRVEELVFFASLKEQYEIV VHHYIQQGEAKKALEVLQKPTVPIDLQYKFAPDLIMLDAYEAVESWMTTNNLNPRKLIPA MMRYSSEPHARNETHEVIKYLEYCVHRLHNEDPGVHNLLLSLYAKQEDDGALLRFLQFKF GKGREIGPEFFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQVDPELAMAEAD KVEDDEDLRKKLWLMVAKHVIEQEKGAKRENIRKAIAFLKETDGLLKIEDILPFFPDFAL IDDFKEAICSSLEDYNNQIEELKQEMNDATHGADNIRNDISALAQRYAVIDRDEECGVCR RKILTVGREYQLARGYASVGQMAPFYVFPCGHAFHAECLIAHVTRSTNEAQAEYILDLQK QLTLLDGEARKDSNGSLTEETITSMAPVDKLRSQLDDAVASECPFCGDLMIREISLPFIL PVEQQQNTSWEIKSHNLGHQRSLGLSL NT seq 2964 nt NT seq  +upstreamnt  +downstreamnt atggattcagggaggcaggtgttcacggtggatcttctggaacgatatgcggccaagggg cgcggaaatatcacctgtatggctgccggaaacgacgtcattttgctcggaaccagtaaa ggttggatcattcgacacgatttcggcgtcggcgattcgtttgatattgatctctctgtg ggtcgtcctggggagcaatccatccatagagtttttgttgatcctggagggagccactgc attgccaccattgttgggagtgggggtgctgacacgttctatactcatgcaaaatggacc aagccccgtcttttaaccaagctaaagggtcttgttatgaatgccgttgcctggaacaga caacagattacagaagcttcaacaaaggaagtcattctcggtacagacaatggccaactt tatgaaatggcagtcgacgagaaggataagaaggagaaatacgtaaagtttttgttcgaa ttattggaacttcccgaggctttcatgagtttgcagatggaaacagcaaccattctcagt gggactagatactatgtaatggctgtaactcctacaagactctattcttttactggtatt ggatcactggaaactgtttttgctagttactcggaacaaacagtgcatttcatggaactt cctggtgaaattcctaacagtgaactgcatttctatatcaagcaaagaagagcaatacat tttgcatggctttctggtgctggtatatatcatggtggtttaaattttggagcacaacat agttctcctgatggagatgaaaattttgtggagaacaaggctcttttgaactattcaact ttgagtgggggttctgaagcggtgaaacccagttctatggcagtttcagaatttcatttc ttgcttcttatcgggaatagggttaaggtcgtaaatagaataagtgagcaaactattgag gagcttcagtttgagcaaacacccgaagcagtttcaaggggtgtcactggattgtgtagt gatgccactgctgggttgttctatgcatatgatcaaaactctgtatttcaggtgtctgtt aatgatgaaggccgagacatgtggaaagtttacctggacatgaaggagtatgcagctgct ttggcaaattgccgcgacccacttcagagggaccaagtatatttggtgcaggctgaagct gcattttccgccaaggattatcttagagcagcatcattctatgcaaaaattaattacata ttgtcattcgaggagatcactttgaagtttatcactgtaaatgaacaggatgctttaaga acctttctgttgtggaaacttgatagccttgcagtggatgacaaatgccaagtaacaatg atttcgacatgggcaactgaactgtacttggataagataaatcgtctactgttggaagat gatactgcagtggataatcgtaattcagagtatcacttgatcattaaagagtttcgtgca tttcttagtgactccaaggatgttttggatgaggcaactaccatgagacttttagaaagt tatggccgagtcgaagaattggttttttttgctagtctgaaggaacagtatgaaattgta gtccaccattatattcagcaaggagaggcaaagaaagcattggaggtgctccaaaaacct actgttcctatagatcttcagtacaagtttgcaccagacctaatcatgcttgatgcatat gaagctgtggagtcatggatgactacaaacaacctcaatccaaggaaactcattcctgca atgatgcgttattcaagtgaaccacatgcaagaaatgaaacacacgaagtcatcaaatat ttggaatactgtgttcatcgtttgcataatgaggatcctggtgttcacaacttgctatta tcactatatgccaaacaggaagacgacggtgcacttttgcgtttccttcaattcaagttt ggaaaaggacgggaaattggcccagagttcttctatgatcccaagtatgctttacgcctt tgcctcaaggaaaagcgaatgcgtgcctgtgttcatatatatagtatgatgtccatgcat gaagaagcagttgctcttgccctgcaggttgatcctgagcttgctatggctgaggctgac aaggttgaagatgatgaggacctgagaaagaagctttggctcatggttgcgaagcatgtt atagaacaggaaaagggagctaaaagggagaacattcggaaggcaatagcatttcttaag gagactgatggccttttaaagatagaggatatattaccattctttccggactttgccctc attgatgacttcaaggaggcaatttgctcgtcattagaggattacaacaatcaaattgaa gaactgaagcaagagatgaatgatgcaacacatggtgccgataacattagaaatgacatt agtgcacttgctcaaagatatgctgtgattgatcgtgatgaagaatgcggggtttgtcgg cgtaagattttaactgtgggtagggagtatcagttggctagaggctatgcatccgtaggc caaatggctccattctatgtgtttccatgcggacatgccttccatgccgaatgcctgatt gcccacgtcacacgtagtacaaatgaagctcaagcagagtatatattggatctgcagaag cagcttactctacttgacggggaagctaggaaggattcaaatggtagccttactgaggaa accataacaagcatggcccccgtagataagctgcggtcgcagttggatgatgcagtggcc agcgaatgcccattttgtggggacttgatgatccgtgagatctctctacctttcatcctg cctgtggagcaacagcagaatacttcatgggagataaaatcgcataatcttggacaccag aggagcctgggtttatctttatga

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