Malus sylvestris (European crab apple): 126610845
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Entry
126610845 CDS
T09027
Name
(RefSeq) pleiotropic drug resistance protein 1-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126610845
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
msyl02000
]
126610845
Transporters [BR:
msyl02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
126610845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
AAA_25
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
126610845
NCBI-ProteinID:
XP_050134946
LinkDB
All DBs
Position
17:24172001..24179601
Genome browser
AA seq
1426 aa
AA seq
DB search
MDTRNHIYEASQSFRANSSSVWRDTGMEVFSRPSMTSNHEDEEEDLKWAALERLPTFNRL
KKGLLTSSSGEASEVDVRKLGFQERNNLIQRLVKDTETQNEKFLMRLRERLDRAGVEIPA
LEVRYEHVKVDAEAHVGTRALPSFFNFYINFFEGILSSLHLLKSRKKHVSILRDLSGIIR
PSRITLLLGPPSSGRTSLLLALAGKLSPDVEFSGKVTYNGLDMNESAPWRASAYISQHDI
HNPEMTVRETLSFSSRCQGVGHRHEWLAELSRREKAANIQPDPDIDVFMKASALQGQKAN
VFTDYVLKILGLDICAETMVGDGMLRGISGGQKKRVTTGEMLVGPAKVLFMDEISTGLDS
STTYQIVNSLRQSMHILNGTAVIALLQPPPETYNLFDDIILLSDGQIVYQGPREHVLEFF
ESLGFKCPERKGVADFLQEVTSEKDQEQYWAHRDKAYKFVTVKEFTDTFQSFHVGKKIKE
DLSVPFDKSDKGAELLAPQKYGVGKKELLKACMSREYLLMKRNSFVYVFKFVQLIVMAFI
TMTLFIRTRMHRDSITDGGIFTGALFFCMIMVMFNGMSELSLTIAKLSVFYKQRDLMFFP
AWAYALPGWLIKVPLSFVEVAIWVFMTYYVIGFDPNVHRLFRQYFIFILVHQMASGLFRL
IAALGRNMVIATTGGSFALLVLFVNGGFVLSRVDIKKWWIWAYWISPMMYAQNAVEVNEF
LGNSWKHVLPNTEQPLGILVLKSRGFFTEQRWYWIGVGGLIGFIILFNLAYVLALTYLDS
YDKAQSSQLDESQENEQAQKTANEGNKASAEINSSKKKGMTLPFQQQSLTFNDIVYSVDM
PPEMKNQGVSEDKLVLLKGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGDI
KISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLFSAWLRLPSEVNSTTRKMFVEEVM
ELVELKPLRKALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM
RTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGEEIYVGPLGHHSCDLIKYFEDI
EGVSKIKGDYNPATWMLEVSSYAQEQALGVDFSKVYKNSELYRRNKELIRQLSTPPPDCS
DLHFPSQYSQSFYAQCIACFWKQRLSYWRNPPYTAVRFLFTAIIAIMFGTMFWDLGSKTK
KQQDLFNAMGCMYCAVQFIGIQNAGSVQPVVSVERTVFYREKAAGMYSPLAYAFAQIIIE
LPYIFIQTLVYAVIVYSMMGHQWTAAKFFWYLFFMYFTLLYFTFYGMMAVAVTPNFHIAT
IISSAFYGVWNLFSGFIVPRTRMPVWWRWYYYICPVSWTLYGLVISQYGDMDDMLDNGVT
VKQFLKSYFGFEHKFLGPVAGIVTAFVILFGLIFAVSIKVFNFQKR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaaatcatatttacgaagcaagtcagagttttcgagcaaacagttcttcg
gtttggagggacactggtatggaagttttctcgaggccgtccatgacttccaaccatgaa
gatgaagaagaagacctcaagtgggctgcacttgaaagacttcccacattcaaccgttta
aagaaaggtttgctcacttcttcaagcggcgaggcaagtgaagttgatgtccgtaaactt
gggtttcaagaaaggaataatttaattcagaggcttgtgaaagataccgaaacccagaac
gagaagttcttaatgaggctgagagagcgactcgatagagctggagtggaaattccagca
ctggaggtaagatacgagcatgtcaaagttgatgcagaagctcatgtaggaacaagggcg
ttgccttcattctttaacttttacattaatttttttgagggcatcttgtctagtctccac
ttgcttaagagtaggaagaaacacgtgtctatcctccgtgatcttagtggaatcattagg
cctagcagaataacattgcttttaggtcctccaagttctggaaggacctcgttattgctg
gctcttgccgggaagctttcgccagatgtagagttctcagggaaggtgacatacaatggc
cttgacatgaatgaatctgcaccttggagagcttctgcctacatcagtcagcatgatatc
cataatcctgaaatgactgtaagagaaaccttgtccttctcttctagatgccagggggtc
ggacatcgtcatgaatggttagcagaactgtcaaggagagagaaagcagcaaatattcag
cctgatcctgatattgatgtcttcatgaaggcatcagctttacaaggccagaaggcaaat
gttttcacagattatgttctgaagattttaggactagacatatgtgcagaaaccatggtc
ggggatggaatgctaaggggtatttcgggtggtcaaaagaagcgtgtcacaaccggtgag
atgctggttggaccggcaaaggttctgttcatggatgagatttctactggtttggacagc
tcaacaacttatcaaattgtgaactcacttaggcaatccatgcacattctcaacggaact
gctgttattgctctcctccagccgccaccagaaacttataacctttttgatgacattata
ctcctctccgatggtcaaattgtgtaccaggggccccgtgaacacgtgctagagtttttt
gagtccttaggcttcaaatgtcctgaaagaaaaggcgtggccgattttctgcaggaagtg
acttcagagaaagatcaggagcaatattgggctcatagggataaggcttacaaatttgtc
acggtcaaggaattcactgatacatttcagtctttccatgttgggaagaaaataaaagag
gacctttcggttccatttgacaagagtgacaagggtgcagaacttttggctccccaaaaa
tatggtgttggaaagaaagaactgcttaaagcctgcatgtcaagagaatacttgctaatg
aagaggaactcattcgtctatgtattcaagtttgtacagcttatagtgatggcattcatt
acaatgacactcttcatacggacaaggatgcatcgagattcaataacagatggaggcatt
ttcactggtgccttatttttctgtatgataatggtcatgttcaacggaatgtctgagctc
agtttgaccattgccaagctttctgttttttacaagcaaagggacctcatgtttttccct
gcctgggcgtatgcacttcccggatggttgatcaaggttcccctctcattcgtggaagtt
gcaatttgggttttcatgacgtactacgtcattggtttcgatccaaatgtgcataggttg
tttagacaatactttatattcatacttgtccatcaaatggcttctggattattccgactt
attgcagcacttggtaggaatatggttattgctaccacaggcggatcatttgcactacta
gtactctttgtaaacggtggctttgttctttcaagagtggatataaagaaatggtggata
tgggcttactggatatcaccaatgatgtatgcgcagaatgcagtggaagtaaacgagttc
ctagggaatagctggaaacatgttcttccaaacacagaacagccattgggaattttggtt
ttgaagtctagaggattctttacagaacaacgttggtattggataggagttgggggcctg
attggatttataatattattcaacttggcttatgtcttggccctcacttatctcgactct
tatgacaaggctcagagtagtcaattggacgaatctcaagaaaatgaacaagctcaaaaa
actgcaaatgaagggaacaaagctagcgctgagataaactccagtaagaaaaaaggaatg
actcttccatttcaacaacaatctctcacctttaatgacattgtgtactctgttgacatg
ccaccggaaatgaagaatcagggtgtcagtgaggataagctggtgcttttgaagggtgtg
agcggtgctttcaggcctggcgtcctcaccgctttgatgggtgtcagtggtgctggtaaa
actactctcatggatgtgctagctggtaggaaaactgggggttatattgacggtgacatc
aaaatttctggatatcccaaaaagcaagaaacctttgctcgtatttcaggatactgtgaa
caaaatgacatccattctcctcatgttactgtctatgagtctttgcttttttctgcttgg
ctccgcctaccctctgaagtcaattctacaacaagaaagatgtttgtggaggaggtgatg
gagcttgtggaactaaaacctttgcggaaagcgctagttggcttgccaggtgtgaatggt
ctctcgactgagcaacggaagaggctcaccattgctgttgaactagtggcaaacccttcc
ataatattcatggacgagccaacttcggggctagatgctagagctgctgcaattgtcatg
agaacagttaggaacacagtggacactggaagaacagttgtctgcaccattcatcagcca
agcatcgacatatttgaatcttttgatgagttattgttgatgaagcgtggaggagaagaa
atatatgtagggcctttaggtcaccattcttgtgatttgatcaagtattttgaggacatt
gaaggagtcagtaaaattaaaggtgattacaaccctgcaacttggatgttggaagttagc
tcttatgcacaagaacaagctttgggagttgatttctccaaagtgtacaaaaattctgaa
ctgtatcggagaaacaaagaacttattaggcaactgagcacgcctcctcccgattgcagc
gatctccatttcccttctcaatactctcaatcattttatgctcaatgcatagcatgcttt
tggaaacaaagattgtcatattggcgcaatccaccatacactgctgtaagatttttgttc
acagctatcatagccatcatgtttggcacaatgttctgggacctgggctccaaaacgaaa
aagcagcaagacctgtttaatgcaatgggctgtatgtattgtgctgttcaattcattgga
atccaaaatgctggtagtgtgcagccagtcgtttcagttgaacgaacggttttctacaga
gaaaaagctgctggaatgtattcacccttagcgtatgcctttgcacagattataattgag
ctcccgtacatttttatccaaactctggtttacgctgtcatcgtgtactccatgatggga
catcaatggactgctgctaaattcttttggtatttgttcttcatgtacttcacattgtta
tatttcaccttttatgggatgatggccgtggctgtgacgccaaatttccacattgctact
ataatttcctccgcattttatggagtgtggaacctcttttccggatttattgtcccgcga
actagaatgcccgtgtggtggagatggtactattatatatgtccagtttcttggacctta
tatggactagttatatcacagtatggagatatggacgacatgcttgacaatggtgtaaca
gttaaacagtttttgaaaagttatttcggcttcgaacacaagtttctaggaccagttgca
ggtattgttacagcgtttgttattctcttcggacttatttttgccgtttccatcaaggtt
ttcaatttccagaagagatag
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