Malus sylvestris (European crab apple): 126610860
Help
Entry
126610860 CDS
T09027
Name
(RefSeq) tryptophan synthase alpha chain-like
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00260
Glycine, serine and threonine metabolism
msyl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01230
Biosynthesis of amino acids
Module
msyl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
126610860
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
126610860
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
126610860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
ThiG
NanE
KH_DUF2096_C
PcrB
TMP-TENI
KDGP_aldolase
Ribul_P_3_epim
NMO
Motif
Other DBs
NCBI-GeneID:
126610860
NCBI-ProteinID:
XP_050134966
LinkDB
All DBs
Position
17:complement(29532477..29533751)
Genome browser
AA seq
318 aa
AA seq
DB search
MATFLRYTSTTGIGFQLKNPQNPFHLHSHSQTRTLSTQKRLVTPMAALSITSPTTNISHT
FRKLKDQGKVAFIPYITAGDPDLSTTAQALKMLDSCGSDLIELGVPYSDPIIDGPVIQAS
ATRSLARGTNFNAIMSMLKEVVPQLSCPIVLFSYLNPILNHGVEKFMHNIMDVGVHGLVV
PDAPFEVTKSLRIEAVKNKIELALLTTPTTPTDRMKDIVEASEGFVYLVSSVGVTGVRES
VNEQVPTLLREIRKATSKPVAVGFGLSKPEHLKQVAEWGADGVIIGSAIVKVLGEAKSPK
EGLKELETFIKSLKSALL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctacttttctcagatatactagtactactggtattggctttcaacttaagaatcct
caaaacccattccatctccattctcattctcaaacacgtaccctctcaacccaaaaaaga
ctagtaaccccaatggctgctctcagcattacctcgcctaccaccaacatctcacacaca
tttagaaaactcaaggaccaaggcaaagtggcatttatcccctacatcaccgccggcgat
cctgatctttcaaccacggctcaagctctgaagatgctcgattcttgtggatcagacttg
atcgaattaggcgtgccatactcggatccaataatagacggtccagttattcaggcttca
gccacacgttccttggcaagagggacgaatttcaacgcaattatgtcaatgttgaaggag
gtggtgccacaattgtcttgtccaattgttctattttcgtacctcaaccctattcttaac
catggtgttgaaaagttcatgcacaacattatggacgttggggtacatgggcttgtggtt
ccagacgctccatttgaagtgacaaaaagtttgagaatcgaagctgtgaaaaataagata
gagttggctctactaaccacaccaactactccaacagatcgaatgaaagacattgttgaa
gcttcagaaggatttgtatacctcgtgagctccgtgggagttaccggtgtacgtgaatcc
gtgaatgaacaagttccaacccttttaagggaaattagaaaggcgacaagcaagcctgtg
gcagttggctttgggctctcaaagcctgaacacttaaagcaagtagccgagtggggagct
gatggtgttattattggtagtgccattgtgaaggtgttgggtgaagctaaatctcccaag
gaagggttgaaagaacttgaaaccttcatcaaatcgttgaaatctgcattattgtaa
DBGET
integrated database retrieval system
