Malus sylvestris (European crab apple): 126610988
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Entry
126610988 CDS
T09027
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl04120
Ubiquitin mediated proteolysis
msyl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126610988
04120 Ubiquitin mediated proteolysis
126610988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126610988
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126610988
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
U-box type E3
126610988
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
126610988
NCBI-ProteinID:
XP_050135130
LinkDB
All DBs
Position
17:complement(4499503..4505602)
Genome browser
AA seq
1025 aa
AA seq
DB search
MATPKPQRSREELEDIVLRKIFLVSLTGSSDSDSRIVYLEMTAAEILSEGKELRLTRDLM
ESVLIDRLSGSFPAAEPPFQYLIGCYKRAYDEGKKIASMKDKNVKSELESLVRQAKKLSV
SYCRIHLGNPESFPNPNFDSNKSNASPLLPLIFSEGGGSVDGFGGSGSSGRIQCPPGFLE
EFFTDSDLDSLDPILKGLYEELREIVLKVSALGNFQQPLRALYLLVKFPFGARSLVNHPW
WIPKGVYLNGRVIERTSILGPFFHVSALPDHPIFKSQPDVGQQCFSDSSTRRPADLLSSF
ATIKTVMSNLYDGLTEVLLLLLKNADTRENVLEYLAEVINKNSSRAHIQVDPLSCASSGM
FVNLSAVMLRLCEPFLDANLTKRDKIDPKYVFYSNRLELRGLTALHASSEEVTEWINKAN
MGSTDGENRLLQSQEATSSGNSVNVKPSSEKAKYSFICECFFMTARVLNLGLLKAFSDFK
HLVQDISRSEDTLSTLKAMQGQTSSPQLEMDIARLEKEIESYSQEKLCYEAQILRDPTLI
QSALTFYRLMVVWLVRLVGGFKMPLPSTCPTEFASMPEHFVEDAMELLIFASRIPKALDG
VLLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYL
VRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWHVPNHRNAWKQIAKEEEKGVYL
NFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIR
IDMKLANEDVSMLAFTTEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKY
EFRPKQLLKQIVYIYVHLAKGDSENIFPAAISKDGRSYNEQLFSAAADVLRKIGEDGRII
REFIELGAKAKVAASEAMDTEATLGDIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQR
HLLSDSSDPFNRSHLTADMLIPDNELKARIQEFIRSQESKKHGEDLSTQSTKATIQTTTS
EMLID
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccccgaaaccccagcggtcccgggaggagttggaggacatagtcctccgcaaa
atctttcttgtatcgctgaccggttcatcggactccgattcccgaattgtttacttggag
atgactgcggcagagattctcagcgaggggaaagagttgaggctcactcgcgacctcatg
gaatcggttctaatcgatcggctctccggcagcttccccgctgctgaaccgccgttccag
tacctgatcgggtgctacaaacgggcctacgacgagggtaagaaaattgcttccatgaaa
gataagaacgtgaagtctgaattggaatctttggttaggcaagcgaagaagctttcggtt
tcgtattgtaggattcatttgggaaatcccgaatcgttccccaacccgaatttcgattcg
aataagtcgaatgcgtcgcctttattgccattgattttctcagagggcggcggttcggtt
gatgggttcggaggaagtgggagtagtgggagaattcagtgcccacctgggtttttggag
gagttcttcactgactccgatttggatagcttggacccaattttgaaggggttgtatgag
gagcttagggagattgtgcttaaggtttcggccctcggaaacttccagcagccattgagg
gctctgtatttgttggttaagtttccgtttggtgcaaggtcactcgtgaatcacccatgg
tggattccgaaaggggtgtacttgaatgggcgtgtgattgagaggactagcattttgggt
cctttttttcatgtcagtgctctgcctgatcatcctattttcaagagccagcctgatgtt
gggcagcagtgcttttctgactcttcaactcgtagaccagctgatctgctatcttcattt
gccacaattaagacagtcatgagtaacttatatgatggccttactgaagttcttctctta
ctactgaaaaatgctgacactcgtgagaatgttcttgagtatctagcagaggtgatcaac
aaaaactcatcaagggcccatattcaggtggatcctctttcatgtgcaagttcaggcatg
tttgtcaatctcagtgcggtcatgcttcggctttgtgagccgtttttggatgcaaattta
acaaaaagggacaaaattgatccaaaatatgtattttacagtaaccgtttggagttaaga
ggtttgactgctttacatgcatcatctgaagaagtaactgaatggattaataaagctaat
atggggagtactgatggtgaaaatcgccttttacaatctcaagaagccaccagttccggt
aatagtgtcaacgtgaagccaagcagtgaaaaagctaaatattcatttatttgtgaatgc
ttcttcatgactgcaagggtgctcaatctgggtttgctgaaagcattttctgactttaaa
catttagtacaggacatttcaaggtctgaagatactctttccacacttaaagccatgcaa
ggccagacatcttctccacaattggagatggatatagctcgccttgagaaggaaatagag
tcgtattcgcaggaaaagctttgttacgaagctcagatattaagggatccgacacttata
cagagtgctcttactttctaccgtttgatggtggtgtggctagttcgcttggttggtgga
tttaaaatgcctctaccatcaacttgccctacggagtttgcttctatgcctgagcatttt
gtggaagatgccatggagttgcttatatttgcttcccggattccaaaagccttggatggg
gttttgttggatgattttatgaacttcattataatgtttatggcaagtccagaatatatt
aggaacccttatctaagagcaaagatggttgaagtcctaaactgctggatgccccgtaga
agtggatcatctgctacagcgaccctatttgaagggcaccaactatctctcgagtatctt
gtgaggaatctcttgaagctatatgtcgacattgagttcactggctctcacacacagttc
tatgacaagtttaatattcgccacaacattgctgaacttcttgaatatctgtggcatgtc
cctaatcatcgaaatgcttggaaacagattgctaaggaagaggagaagggtgtttacttg
aatttcttaaactttttgatcaatgatagcatctatcttctggatgaaagtcttaacaaa
attcttgaactcaaagaactggaagctgagatgtcgaacactgcagaatgggagcgcaga
cctgctcaagaaaggcaggagagaacccgcctattccattctcaagagaatattatccga
atagatatgaaattagcaaatgaagacgttagtatgctggcatttactacagagcagatt
acagctccttttctacttcctgagatggttgaaagggtggccagcatgctcaattacttt
ttgttgcaattagtaggccctcaaagaaaatcgcttagtttgaaagaccctgagaaatat
gaattccgtccaaagcaattgcttaagcagattgtatacatatatgttcatttggcaaag
ggtgattcagaaaatatatttccagctgccatctcaaaggatggccggtcgtacaacgag
cagttgtttagtgctgcggcggatgtcctaaggaaaattggtgaagatgggaggatcata
cgagagtttatcgagttaggtgcgaaagcaaaggttgctgcttcggaggccatggacact
gaagctactcttggggatataccagatgaattcctcgatccaattcagtacactttaatg
aaggatccagttatcttaccgtcttcaagaatcacggtagaccggcccgtcattcaaagg
catcttcttagtgatagctctgatccgttcaaccgatcacatcttactgcggacatgctg
ataccagacaatgaattaaaggcaaggatacaggagttcattaggtcccaagaatcgaag
aagcacggggaagacttgagcacgcagagcaccaaggcgacgatacaaactacaactagt
gagatgctaattgattag
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