Malus sylvestris (European crab apple): 126611038
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Entry
126611038 CDS
T09027
Name
(RefSeq) oligouridylate-binding protein 1B-like
KO
K13201
nucleolysin TIA-1/TIAR
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126611038
03041 Spliceosome [BR:
msyl03041
]
126611038
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
126611038
Spliceosome [BR:
msyl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
126611038
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
126611038
NCBI-ProteinID:
XP_050135171
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All DBs
Position
17:13438354..13442920
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AA seq
426 aa
AA seq
DB search
MQHQRLKQQQQQQQALMQQALLQQHSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYV
GNIHTQVTEPLLQEVFASTGAVESCKLIRKEKSSYGFIHYFDRRSAALAIVSLNGRHLFG
QPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYNSCSDARVMWDQKTGR
SRGFGFVSFRNQQDAQNAINDLTGKWLGSRQIRCNWATKGAGANEDKQSSDAKSVVELTN
GSSEDGKDTTNSEAPENNPQYTTVYVGNLAPEVSQLDLHRHFHALGVGVIEEVRLQRDKG
FGFVRFNTHAEATLAIQMGNTQSILCGRQLKCSWGSKPTPPGTVSNPLPPPVAAPPLQGL
SATDILAYERQLAMSKMAGVHALMHPQGQHPLKQAAMGMGTAGASQAIYDGGFQSVAAAQ
QLMYYQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaccagaggctgaagcagcaacagcagcagcagcaagctctgatgcagcaggct
cttctacagcagcattctctctaccatcctggcctcttagctccccctcagatagagcca
atcccaagtggaaatctgcctcctggttttgatccaagtacttgccgcagtgtgtatgtt
gggaacatccatacccaggtgacagaaccacttcttcaagaggtttttgcaagtactggt
gctgttgaaagttgcaaacttataagaaaggaaaagtcatcctacgggttcattcactat
tttgatcgtagatcagctgctcttgcaatagtgtctctaaatggcaggcatctgtttggg
cagcctatcaaagtaaattgggcttatgctagtggtcagagggaggatacatcaggtcat
ttcaacatttttgttggtgatctgagccctgaggttactgatgctacattatttgcatgc
ttctcagtttataacagttgttcagatgcaagggttatgtgggatcaaaagacggggcgt
tcaagaggctttgggttcgtctcattccgaaaccaacaggatgctcaaaatgctatcaat
gacttaactggtaagtggcttggcagcagacagatacgttgcaactgggcaacgaaaggt
gctggtgccaatgaagacaagcagagttcagatgctaaaagtgtggtggaactaacaaat
ggctcatcagaagatggaaaggacacaacaaacagtgaggctccggagaacaaccctcag
tatactactgtttatgtgggcaatcttgctccagaggtcagtcagctcgatctgcatcgg
cattttcatgctcttggtgttggagtgattgaggaagttcggctgcagcgtgacaagggc
tttggttttgtgagattcaatacacatgccgaggcaactctggctattcaaatgggaaat
actcagtccatcttgtgtggtagacaactaaagtgctcatggggtagcaagcctactcca
cctggaacagtttcaaacccactcccaccgccagtagcggcaccacctttgcagggcctc
tctgcaaccgacattttggcctatgaacggcaactggcaatgagcaagatggctggtgtc
catgccctcatgcaccctcagggacagcatccccttaagcaggcagcaatgggaatgggc
actgctggagcaagccaagctatatacgacggtggattccagagtgttgctgctgcccag
cagctcatgtactaccagtaa
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