KEGG   Malus sylvestris (European crab apple): 126611057
Entry
126611057         CDS       T09027                                 
Name
(RefSeq) protein PAT1 homolog 1-like
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    126611057
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:msyl03019]
    126611057
Messenger RNA biogenesis [BR:msyl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126611057
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     126611057
SSDB
Other DBs
NCBI-GeneID: 126611057
NCBI-ProteinID: XP_050135199
LinkDB
Position
17:complement(11124959..11131135)
AA seq 803 aa
MERSNGTDFRDLLDRSSSENKLFDASQYEFFGQNLVDEVELGGLDDEEDRKPLFGPVDNE
YHLFEKEEGLGLGSLSDIDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWA
QDGDFNNWLDQHMFDTEISQEGKRWSSQPQPSSALFSESKQQKPLYRTSSYPDQQPVQHH
FSSEPIVPPKSAFTSFPPPGNKFQQGSPHQLNLSAVAGGSQLPFSAPNLSPLSNSNLHMA
GLPLGLHYGGNMPQFANPGLPFNSRSQNHWVTHAGVLHSDHSSLINNILQQQLPHQDGLI
SPQLLAAQQQLQQQRLHHSVQPSLAHFAAMQSQFYGTHPSSSHKSMHGLSDVRDHRPKRG
KQRFSQGSDAGSQKSETGWIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQASLS
KKAAGSRSKHPFCPSHLRESPSRGRNSTDQHTHSSVDALGRIPLASIRRPRPLLEVDPPT
GSGDGKQASEKPLEQEPMLAARIAIEDGLCLLLDVDDIDRLLQGQPQDGGVQLRRRRQIL
LEGLAASLQLVDPLGKGSHSAGLAPKDDLVFLRIVSLPKGRKLLSRFIQLLFPGSELARI
VCMTVFRHLRFLYGGLPSDPAAAETTTNLAKTVSTCINGVDLRALSACLVAVVCSSEQPP
LRPLGSPAGDGATIILKSVLERATVLLSDPHAAGSCSISNRTLWQASFDEFFGLLTKYCL
SKYETIVQSIFTQSQQSAEVIGSEATRAIHREMPVELLRASLPHTDEHQRKLLSDFSHRS
MPISGLNAHGGSGGQMNSESVRG
NT seq 2412 nt   +upstreamnt  +downstreamnt
atggagagatctaatggtacagatttcagggacttgcttgatcgttcctcatcagagaat
aaactctttgatgcgtcacaatatgaattttttggtcaaaatctggtggacgaggttgag
ttggggggtttggacgatgaggaagacaggaaacctttattcgggcctgttgataatgag
taccatttatttgagaaagaagagggtcttggtttgggatctttatctgacatcgatgat
ctggcaagtacttttgcaaagttaaacaaagttgtaacaggaccaagacatccaggagtt
attggcgacagaggttcaggatctttttcacgggaaagttcatcagctactgattgggcc
caagacggagatttcaataactggttagatcagcatatgtttgatacagaaatttcccag
gaaggaaagaggtggtcttcacagccccaaccttcttctgctctattttcagaatcaaaa
cagcaaaagcctttgtacagaacatcttcatacccagaccagcagccagtccagcatcac
ttctctagtgaaccaattgtaccgcccaagtcagcattcacatcattccctcctcctgga
aacaagttccagcagggttcaccacatcagctgaatctttctgctgttgctggtggttcc
cagttgcctttttctgcaccaaacctttctcctttatctaactctaatcttcatatggcc
ggtttacctcttgggttgcattatggagggaacatgcctcagtttgccaaccctggcctt
cctttcaatagcaggtcacaaaatcattgggttacccatgctggagtattgcacagcgat
cattccagcctcataaacaatatattgcagcaacagctccctcatcaagatggacttatt
tccccacaattactggcagctcagcagcagctacaacagcagagattgcaccactcggtt
cagccatctttggcccattttgctgcaatgcagtctcagttttatggtactcatccttct
tcatctcataagtcaatgcatgggttgtccgacgtaagagatcatagaccgaaaagagga
aaacaacgtttttctcaaggctctgatgctggtagtcagaaaagtgagactgggtggatc
cagttcaggtctaagcacatgacatctgaagagatagagagtattcttaaaatgcagcat
gcagcaacacatagcaatgacccctatattgatgattactaccaccaggcaagtctttcc
aaaaaagcagctggctcgcgatcgaaacatcctttttgcccatctcatcttagagagtcc
ccctcccgaggtcgtaatagtactgatcagcatactcatagttctgttgacgctcttggg
agaattcctcttgcttccatacgtaggcctcgccccctccttgaagttgatcctcccact
ggttctggtgacggcaaacaggcctctgagaagcctctggagcaggaacccatgcttgct
gctagaattgccattgaggatggcctttgtctccttcttgatgttgatgacattgatcga
ctgctacaaggtcagccccaagatggtggggttcaactcaggcgaaggcggcaaatactg
ctagaagggttggcagcatcgcttcagcttgtcgacccacttggtaaaggcagccactca
gcgggtttggctccaaaggatgaccttgtgttcctacgtatagtttctcttcctaagggg
cgcaagctcctttctaggtttattcagcttctcttccctggtagtgagcttgcccgtatt
gtctgtatgacagttttccgtcatttaaggtttttgtatggtggtctaccctctgatcct
gcagctgctgagacaactactaatcttgcaaagacagtttctacatgcataaatggtgtg
gatcttcgtgcattaagtgcttgtcttgttgcagttgtttgttcatcagagcagccacca
cttcgaccccttggaagccctgctggagatggggccactattattctaaaatctgttctt
gaaagggcaactgtactcttaagcgaccctcacgctgctggaagctgtagcatttctaac
cgcaccctttggcaggcatcctttgatgaattttttggtctgctcaccaagtattgcctg
agtaagtatgaaactatagtacaatcaatatttacacagagtcagcaaagtgcagaagtt
attggttcagaggccaccagggcaatacatcgtgaaatgcctgtggagcttctgcgtgct
agtcttcctcacacagatgagcatcagcggaagcttttgtcagatttttctcatcgatca
atgcccatttctggtcttaatgcccatggtgggagcggaggtcaaatgaactctgaatca
gtgaggggataa

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