KEGG   Malus sylvestris (European crab apple): 126611282
Entry
126611282         CDS       T09027                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
msyl  Malus sylvestris (European crab apple)
Pathway
msyl03420  Nucleotide excision repair
msyl04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:msyl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    126611282
  09124 Replication and repair
   03420 Nucleotide excision repair
    126611282
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:msyl03051]
    126611282
   03400 DNA repair and recombination proteins [BR:msyl03400]
    126611282
Proteasome [BR:msyl03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    126611282
DNA repair and recombination proteins [BR:msyl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      126611282
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_3 MmeI_C UBA_RAD5A TECR_N
Other DBs
NCBI-GeneID: 126611282
NCBI-ProteinID: XP_050135452
LinkDB
Position
17:complement(27663964..27669774)
AA seq 369 aa
MKLTVKTLKGSHFEIRVQPTDAVMAVKKNIEDIQGKDNYPCGQQLLIHNGKVLKDETTLA
DNKVTEDGFLVVMLSKNKTSGLAGSSSSQPPSTNPPTTPPTTNSTNRTEAPIQEPPLQST
TSAPDTSSVHSDTYGQAASTLVAGTNLEQTIQQIMDMGGGNWDKETVTRALRAAYNNPER
AVDYLYSSIPETTEVAVPVGNFPASQATDVAPVSGAPNSAPLNMFPQETLSGAGAGALGS
LDFLRNNRQFQALRSMVQSNPQILQPMLQELGKQNPQLLRLIQEHHTEFLQLINEPVEGS
EGDIFDQPDGPDQDLPHAINVTPAEQEAIERLEAMGFDRALVIEAFLACDRNEELAANYL
LENAGDFED
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgaagctcactgtaaagaccctcaagggcagccatttcgaaattagggttcagcccact
gacgccgttatggctgtgaagaagaacattgaggatatacaaggaaaagataattacccg
tgtggacagcagttactgattcacaatgggaaggtcttgaaagacgaaaccacattggct
gacaacaaggtcacagaagacggttttcttgttgtcatgcttagcaagaataaaacttca
ggcttggcagggtcttcttcttctcagcctccctctacaaatcctcctacaactccacca
accacaaattctacaaacagaactgaagctcccatacaagaaccacccttgcagagtacc
acatctgctccagatacttctagtgtgcatagtgatacctatggtcaagctgcttcaact
ttagtcgctggtactaatcttgagcagactattcaacaaataatggatatgggtggtggc
aactgggacaaagaaacagttacacgcgccttacgagcagcttataacaatccggagcga
gcagtggactacttgtactctagtataccagaaacaacagaagttgcagttcctgtaggt
aatttccctgcaagtcaggcaactgatgttgcccccgtctctggagcgcctaactctgct
cctttgaatatgtttcctcaggaaacactctctggtgctggcgctggggcccttggatcc
ctcgacttccttaggaataatcgccagttccaagcactgcgctcaatggtgcaatcaaac
ccacaaattttgcagcccatgctgcaggagctcggaaagcaaaacccccagcttttaaga
ttaattcaggagcaccatactgagttccttcagttaataaatgaacctgttgagggttct
gaaggtgacatatttgatcagcctgacggtcctgaccaagatttgcctcatgccatcaat
gtaacccctgccgagcaggaggccattgaacgacttgaggcgatgggatttgacagagcg
ctggtcattgaggcttttctggcatgcgatcgcaacgaggaactggcagccaactaccta
ttggagaacgctggagatttcgaggactga

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