Malus sylvestris (European crab apple): 126611312
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Entry
126611312 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126611312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126611312
03036 Chromosome and associated proteins [BR:
msyl03036
]
126611312
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126611312
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
126611312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
126611312
NCBI-ProteinID:
XP_050135489
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Position
17:complement(9696238..9703115)
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AA seq
1304 aa
AA seq
DB search
MFSPGTKRPNANARRDLGSPATPLTENLGPGSDNSFPNRPSTGTPAPWAPRLSVLARVLP
ANQNEKGDETKPVFVGEFPQVVRDGQANMLQKHAHGDAYVSGGMERGTSLAWIICGNRLF
VWSYLSPAVSTNCNVLEIPLNVFEGGDVGRSGGNCWLLCVVNGDSASTRTKKVVKHCSSA
GIVLCHKKTRAVVYWPEIYAEERTDPIVSVASADELEVNSSPIDRKTTPKRQQLISRQRG
SLTGFCTFNSLIASAVPDSQDVCVALACSSDGQLWQFHCSPSGVSRKKVYLDDQTLPSLG
GDNVQILGSEGYPRSLTWCFPNLQIQDSNRQFFLLTDREIQCLSIELGADFIVSKLWSHE
IIGSDGDSGIKKDLAGQKRIWPLDMQVDYHGKVTTILVATFCLDRGSSSSYTQYSLLTMQ
YKSGISLEKKAPVQVIIPKGRVEEEDFLFSMKLRVGGKPQGSAIILSGDGTATVSHYFRN
STRLYKFDLPYDAGKVLDASILPSTDDGEEGPWVVLTEKAGIWAIPEKAVILGGVEPPQR
SLSRKGSSNEGSAQEERKNLSFLGNIAPRRATSEAWDAGDRQGAVTVTARQTAQDEESET
LLSQLFQDYHLSGQVDASFEKLKRSGAFERDRETNVFARMSKSIVDTLAKHWTTTRGAEI
LAMAVVSSQLMDKQQKHTKFLQFLALSKCHEELCSRQRHSLQIILEHGEKLAGMIQLREL
QNIISHNRSRGRSPSRSSPENQISGALWDLIQLVGERARRNTVLLMDRDNAEVFYSKVSN
LEQVFDCLDKQLEYVISAEQPFEIQVQRACELSNACVTIVRTAMQYRSEHHLWYPPPESL
TPWYSQAVVRNGMWHLASLMLQLLKEASQLDASAKLDLYTHLEALAEVLLEAYAGAVTAK
VEQGGEHKGLLDEYWNRRDALLDTLYQEVKESVEAGNQNLNEGTEDLKEEILARLSSCLL
PMAKRHECYSTLWKICCDLNDSGLLRNLMHDSMGPNGGFSYYVFKQLYLRRQYSKLLRLG
EEFHEELSIFLKYHQDLLWLHEVYLRQFSPASETLHELALSQAENSISEAEEGTGPTYLT
MLPKLADRKRLLNLSKIAAIAGKDANCETKVKRIEADLKILKLQEEILNLLPDDETKQSL
DTKLLHPEDLIKQCLEGESAELSLRAFDVFAWTSSSFRQTHANLLEHCWRNAADQDDWSQ
LYQASVSEGWGDEETLQNLKDTVLFQASNRCYGPEAETFGEGFEEVLPLRQEIAEPTVMK
DTVSSVEAVLMQHKDYSEAGKLMLTAIMLGSLQDDTEEGPVPME
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atgttctctcccggaaccaagcgacccaatgcgaacgctcgccgggatctaggatctccg
gccacgcccctcaccgagaacctggggcccggctcggacaactctttcccgaatcggccc
agcaccggcaccccggctccctgggctcctcgcttatctgttctcgccagggttttaccg
gcgaaccaaaatgaaaagggggatgaaactaagcccgtctttgtcggagagtttccgcaa
gttgttcgtgatggacaggccaatatgctgcagaagcatgctcatggtgatgcatatgta
tccggtggaatggagaggggaacgtccctggcatggattatatgtggaaacagactcttt
gtgtggagttatctgtctcctgcagtgtcgacgaattgcaatgttcttgaaattcctctg
aatgtctttgaaggtggggatgttggcaggagtggtgggaactgttggttgctttgtgtt
gtgaatggggatagcgcgtccacgagaacaaagaaagttgtaaaacattgtagctccgct
ggtattgtattgtgtcacaagaaaactcgagctgttgtgtactggcctgaaatttatgct
gaagagagaactgaccccattgttagtgttgcatctgctgatgaattggaggtgaattct
tcacctattgataggaagaccacaccaaaacggcaacaactgatcagcaggcagaggggt
agtttgactgggttttgtacatttaactctttgattgcttctgcagtccctgattcccag
gatgtgtgcgttgcacttgcctgtagttctgatggccagctatggcagtttcattgcagc
ccctctggtgttagccgcaagaaagtatatctggacgatcaaactcttccctccctaggg
ggtgacaatgttcaaattttaggaagtgagggctatccaaggtcactgacctggtgtttc
ccaaatcttcaaattcaggactctaaccggcagttttttcttctgacagatcgtgagatt
caatgccttagtattgaacttggtgctgatttcattgtgtcaaagctctggtctcatgaa
attattggctcagatggtgattcgggaataaagaaagatttggccgggcagaagcgaatc
tggccgcttgatatgcaggtagactatcacggtaaagtgactaccattctagttgccacc
ttctgcctggaccggggtagtagttccagctacacacagtactctcttttgaccatgcaa
tacaaatctggaattagtttagagaaaaaagctcctgtccaagtgataatcccaaaagga
agagtagaagaggaagacttcttattctccatgaaactgcgagtaggaggtaagcctcaa
ggatcagcaatcatactttctggtgatgggacggcaacagtatcccattactttagaaat
tctacacggctctataaatttgacctaccttatgatgctggaaaggttctagatgcttca
attcttccatctacagatgatggtgaagaagggccatgggttgtgcttactgagaaggca
gggatatgggcaatacccgagaaggctgttatacttggtggggttgaacctcctcaacga
agtttgtcacgtaaaggtagctcaaatgaaggatctgcacaagaagagagaaagaacctc
tcatttttgggcaatattgcgcctagaagggctacttctgaagcatgggatgctggagat
agacaaggggctgtgactgtaactgcacgtcaaactgctcaagatgaagaatcagaaact
ttacttagccagctgttccaagattatcatttatctgggcaagttgatgcctcatttgaa
aagctaaaaagatctggggcattcgaaagggatagagagacgaatgtttttgcacgaatg
agcaaatcaattgttgacactttagctaagcactggacaacaactagaggagctgagatt
ttggcaatggctgttgtatcctcccaactcatggataagcaacagaagcatacaaagttt
ctccagtttcttgctttatccaaatgtcatgaggagctgtgttcaagacagagacattct
ttgcaaattatcttggaacatggtgagaagcttgctggaatgattcaactaagggaattg
cagaacattatcagccataaccgctcccgtggacgtagcccatcccgttctagtccagaa
aatcaaatatcaggagctctctgggatcttatccagttagttggtgagcgagcccgccgg
aatactgttcttctgatggacagggacaatgctgaagtattttacagtaaagtttcaaat
cttgaacaagttttcgattgcttagacaaacagctagagtatgtaataagtgcagagcag
ccgtttgagattcaggttcagagagcttgtgaactgtcaaatgcatgtgttactatagtt
cgtacagccatgcaatacagaagtgagcatcacttatggtatccgccacctgagagcttg
acaccttggtattctcaagctgtggtacgcaatgggatgtggcacctcgcttccctcatg
ctgcagctgttaaaggaggcatctcaacttgacgcgtctgccaaattagatttatatact
catctggaagcgctggctgaagttttgctggaggcatatgctggtgctgtcacagctaaa
gttgaacaaggaggtgaacacaaaggcttattggatgagtattggaacaggagggatgca
cttctggacaccctttatcaagaagtcaaggaatctgtggaagctgggaatcagaattta
aatgaaggaactgaggatctaaaagaagaaattcttgctaggctttcgtcatgtttgttg
cccatggcaaaacggcatgaatgctacagtacattatggaaaatatgctgtgatctaaat
gattctggactactaagaaatctgatgcacgacagcatggggcctaatggagggttcagt
tactatgtgttcaaacaactctatctgaggaggcaatattccaaacttctaaggcttggg
gaagagtttcatgaagagctatccatattcttaaagtatcatcaagaccttctgtggctt
catgaagtttaccttcgtcaattttccccagcttcggaaactcttcatgaattagctctt
tctcaagccgaaaactcaatttccgaggctgaagaggggactggtcctacgtatctgact
atgttaccaaaactggcagacagaaagcgtcttttgaatctctcaaaaatagctgcaata
gcaggtaaagatgctaattgtgagaccaaagtgaagcgcattgaggctgatttgaagatt
ctaaagttgcaggaagaaatactaaacctccttcctgatgatgaaacaaagcaaagcctt
gacacaaagctacttcatccagaagatcttatcaagcagtgccttgaaggtgaaagcgca
gagctctcattgcgggcttttgatgtttttgcatggaccagctcctctttccgtcagacc
cacgcaaaccttttggagcattgctggagaaacgctgctgatcaagatgattggagtcaa
ctctatcaagcatcagtatccgaagggtggggtgatgaagaaaccttgcaaaacctgaaa
gacaccgtgctcttccaggcttcaaacagatgctatggacccgaagctgaaacttttgga
gaagggtttgaggaagtgttgccgctgagacaagaaattgcagagcctacagtcatgaaa
gatacagtttcttctgtggaagccgtactcatgcaacacaaagattactccgaggcaggc
aagctaatgctgactgcaatcatgttgggtagcttacaggatgataccgaagaaggtcct
gtgcctatggagtaa
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