Malus sylvestris (European crab apple): 126611517
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Entry
126611517 CDS
T09027
Name
(RefSeq) long chain base biosynthesis protein 2a
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00600
Sphingolipid metabolism
msyl01100
Metabolic pathways
msyl04382
Cornified envelope formation
Module
msyl_M00094
Ceramide biosynthesis
msyl_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
126611517
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
126611517
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
msyl01007
]
126611517
Enzymes [BR:
msyl01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
126611517
Amino acid related enzymes [BR:
msyl01007
]
Aminotransferase (transaminase)
Class II
126611517
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
126611517
NCBI-ProteinID:
XP_050135776
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Position
17:complement(333390..337566)
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AA seq
490 aa
AA seq
DB search
MIAIPYLTALTTYFSYGLLFVFGQVRDFFRKIIDWWSASNLQGYAPICLGLEDFYIRRLY
LRIQDCFNRPIASAPDAWFDVVERYSNDYNKTLKLTKKTSRCLNLGSYNYLGFAASDEYC
TPRAIETLKKYSPSTCSSRVDGGTTDLHNELEECVANFVGKPAAIVFGMGYVTNSAILPV
LMGKGGLIVSDSLNHNSIVNGARGSGARVCVFQHNTPAHLEEVLREKIAEGQPRTRRPWK
KIIVIVEGIYSMEGELCKLPEIIAICKKYKAYTYLDEAHSIGAVGKTGRGVCELLGVDTA
DVDIMMGTFTKSFGSCGGYIAGSKELIQYLKYTCPAHLYATSISPPAAQQIICAIKVLLG
EDGSNRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLK
QNVAVVTVAFPATPLLLARARICISASHTREDLIKALEVFGRVGDLVGIKYFPAEPKKAQ
AEEERLLKVD
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgattgcgatcccttatttaaccgcgttaaccacgtacttcagctatggattgctcttc
gttttcggccaagtcagagatttcttccgcaaaatcattgactggtggagtgctagcaat
ttgcagggttatgctccaatctgtttaggacttgaagatttctatattcgccggctttat
cttcgaattcaggactgtttcaatagacctattgcaagtgctcctgatgcttggtttgat
gtggttgaacgctactccaatgactacaacaaaacactcaagctgacgaaaaaaactagt
cgatgccttaacttaggatcttacaattaccttggctttgctgcatccgatgagtactgc
acgcctcgcgctattgagacgttgaaaaaatattctcccagtacctgtagcagcagagtt
gacggcggcaccaccgatttgcataatgagctggaagagtgtgttgcaaattttgtcggg
aaacctgctgcaatagtttttggaatgggttatgtcacaaactctgctatccttcctgtc
ctgatggggaagggaggcttgattgttagtgattctttgaaccacaactctattgtcaac
ggcgcaagaggatctggagctagagtttgtgttttccaacacaatactcctgctcatttg
gaggaagttttgagagaaaaaatcgcagaggggcagcctaggacccgcagaccctggaag
aagataatcgtcattgtggaggggatatacagcatggaaggggagctttgtaaacttcct
gagattatagcaatctgcaaaaaatataaggcatatacatatttggatgaggcccacagc
attggagcagtagggaaaacaggaagaggtgtttgtgagctcttaggagtcgatacagct
gatgtagatatcatgatgggaacatttaccaagtcatttggatcatgtggtggctatatt
gcaggatctaaggagcttatccaatacttgaagtacacttgccctgctcatctttatgca
acttcaatatcaccaccagctgcccaacaaataatatgtgccataaaggtccttcttgga
gaggatggttccaatagaggtgcccaaaaacttgcacggatacgagagaatagcaacttt
ttcaggtcagaactacaaaaaatgggttttgaggttttgggggataacgactctccagta
atgccgattatgctatacaacccagccaaaattcctgccttctcacgggagtgcctcaag
cagaatgtagctgttgtgacagtagcatttccagcaaccccgctactgttggcaagggca
cgtatatgcatatctgcatctcatacaagggaagacttgatcaaagccttggaggtcttc
gggagggttggtgatctggtgggtataaaatacttccccgctgaaccaaagaaggcgcag
gccgaagaagaaaggttgctgaaggtggactga
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