Malus sylvestris (European crab apple): 126611602
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Entry
126611602 CDS
T09027
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3
KO
K03255
protein TIF31
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
msyl03012
]
126611602
Translation factors [BR:
msyl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126611602
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
eIF3_p135
TPR_10
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
PAM2
CLU
Motif
Other DBs
NCBI-GeneID:
126611602
NCBI-ProteinID:
XP_050135867
LinkDB
All DBs
Position
17:26219438..26230764
Genome browser
AA seq
1659 aa
AA seq
DB search
MAPKSGRGKNRSKSDKKKKEEKVPSVLDITVITPYDTQVILKGISTDKILDVRKLLAVNV
ETCHLTNYSLSHEVKGKKLNEKVEVVSLKPCVLKMVEEDYSDEAQAEAHVRRLLDLVACT
TRFAKPKRSATNPDSKSKKNGNRPRTRTSGPPSPSDAGDGRPTSPHSEPSFSAISESLGM
VAIHPTPKLSDFYEFFAFSHLSPPILHLKRCNLEDAHERRDGDYFQIQIKICNGKQVQVV
ASVQGFYTVGKQFLQSHSLVDLLQQFSRAFANAYESLTKAFVEHNKFGDLPYGFRANTWL
VPPSVAESPSEFPPLPTEDENWGGNGGGQGRNGEYDLRPWATDFAILASLPCKTEEERVI
RDRKAFLLHGRFIDVAVFKAASAIRGVIDSNMNAKETLKCSQGSVLFEDRIGDLSIVVKR
DTTDAWSNSDLSTKEAAQRLLLKGLTSDESVVVRDTSSLGEVNVRHCGYTATIKVVGNIK
NGNREAKDIDIEDQPDGGANSLNVNSLRVLLQKSKTESLAPSLNGLETSTCLVRKVIKES
LKNLENEPASLERSIRWELGSCWVQHLQKQETAAVNNSDSPKADKEAEPIVKGLGKQFKL
LKKREKKTIGESRTYDEEEIDSSESRTVELENGDIDDEPELKQLISEEAFLRLKETGTNL
HLKSADELIKMAHKYYDEIALPKLVTDFGSLELSPVDGRTLTDFMHLRGLKMRSLGRVVE
LSENLPHIRSLCIHEMVTRAFKHLLEVVISRVDKITDLSAAIASTLNFLLRGSVVEDDAL
RLQWLRLFLSKRFGWTLKDEFPHLRKLSILRGLCHKVGLELAPKDYDMDFQNPFSKYDII
SMVPVCKHVTCSSADGRNLLESSKIALDKGKLEDAVNFGTKALAKMIAVCGPYHRVTASA
YSLVAVVLYHTGDFNQATIYQQKALAINERELGLDHPDTMKSYGDLSVFYYRLQYIELAL
KYVNRALFLLHFTCGLSHPNTAATYINVAMMEEGMGNVHVALRYLHEALKCNQRLLGADH
IQTAASYHAIAIALSLMEAYSLSVQHEQTTLKILQAKLGPDDLRTQDAVAWLEYFESKSL
EQQEAARNGFPKPDALIASKGHLSVSDLLDFITPDQDSKVNDAHRKQRRTKVHQSSDNIP
PAHQNAIAYDDLPNHGVENTTILIDDKTDAVEDRSVHQDLEEKGDISTKGLSVTSITVEE
TTSDEGWQEANSKGRSGSTATGRKFGRRRPESEYSNFRESKYRRDVISPPRTSAPKSFPS
DLYSPKQSKVRTLSAGEDSVKLQSKISVSKVPSIPATTNLASKSVSYKEVALAPPGTVLR
SLHDKVESLSVENAEAETCNTPAETLKIEESIGNSAVEVIPNDGEEGTGLASASQSEDTG
PEIVEERSGEKNGSKLSAAAEPYNPRPLTTTLPLNPVAVTSLYDVRDSQVMLSAPVLPPV
AARVPCGPRSSLYYKTNYSFRLRQGVQKFQRSVTERGGSGPPRIMNPHAPEFVPGRTWHV
DTLDECAYVATESNPSLEVSGAAEEERQEISSSKAEDGILRKSISDSEKSELARQMLLSF
IVKSVQQNKDPANESKQGNQSDAIEDDSAIIKIHYGDEGKRDLVSESGGSEQPTVTDVKS
KEGGDAEGFTLVTNRRRSRQLRSGVAGLYNQQSISASVH
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaagtcagggagaggcaagaacaggtccaagtcagacaagaagaagaaagaa
gagaaggttcccagtgttcttgacatcactgtcattaccccatatgacacacaagtcatt
ctcaagggcatctccactgacaagatacttgatgtgagaaaattactcgctgtaaatgtg
gagacatgccatcttacaaactattccctctctcatgaagtcaaggggaaaaaattgaat
gaaaaggtggaagtcgttagcctgaaaccttgtgttttaaaaatggttgaagaggactac
agcgatgaagcccaggctgaggctcacgtgcggcgattgctggacctggtggcctgcacg
acccgattcgccaagcccaaacggtccgccactaacccggactccaagtctaagaagaac
ggcaataggcctcggaccaggacatcgggccctccatctccgtccgatgcgggcgatggc
cgtccgacttcaccgcattccgaaccgtccttttcggcgatctcggagagcctagggatg
gtcgccattcatccgacgccgaagctctccgacttctatgagttcttcgctttctctcac
ctctcccctccaattctccatttgaagagatgcaacttggaggatgcacatgagaggcgc
gatggtgactattttcaaattcagattaagatttgcaatgggaagcaagtacaagttgtt
gcatctgtccaagggttttacactgtgggaaagcagtttttacaaagccactcgctcgtg
gatcttctgcagcagttcagcagagcttttgcaaatgcatatgaatccttgacgaaagct
tttgtagaacataacaagtttggcgatcttccatatggtttccgagcaaatacatggctt
gtccctccatcagttgctgagtctccatcggaatttccacccctgccaaccgaagatgaa
aattggggtggaaatggtggaggccagggaagaaatggcgaatatgatcttcgaccatgg
gctacagattttgcaatactggcttcccttccttgcaaaactgaagaagagagggttatt
cgagaccggaaggcatttttgcttcatggtagatttattgacgttgcagtctttaaagct
gcttcagcaatacgcggtgtaatagactccaatatgaatgcaaaggagacactgaaatgt
tctcaaggctccgttcttttcgaggatcgcattggagacttgtccattgttgtaaaacgt
gatacaacagatgcatggtcaaactctgatttgtctaccaaggaggctgcgcagaggctt
ttacttaaggggttaacttctgatgagagcgtagttgttcgtgatacttcgtccttgggt
gaagtcaatgtaaggcactgtggatatactgcaacgattaaagttgtcggtaacataaag
aatggcaaccgcgaggctaaagatattgatattgaagatcaaccagatggaggagctaat
tctctcaatgttaacagcttgagggttctgcttcaaaagtctaaaactgaatcattggct
cccagtttgaatggtttagaaacttctacgtgtctggttcggaaagtaataaaagagagc
ttgaaaaatctagaaaatgagcctgccagtttggaaagatctatcagatgggagcttggt
tcttgctgggtgcaacatttacaaaagcaggaaaccgctgcagttaacaactctgatagt
cctaaggctgataaagaggctgaaccgattgtgaaaggtctgggaaagcaatttaaactt
ttgaagaagagggaaaagaaaacaattggagaaagcagaacatatgacgaggaagaaatt
gattctagtgaaagccgaacagtagagctagagaatggagatatcgatgatgagccagaa
ttgaaacagttaatttcagaagaagcctttttgcgcctcaaagaaacgggaaccaatctt
cacctaaagtctgcagatgagcttatcaagatggcacacaaatattatgatgaaattgcc
ttgccaaagctggtaacagacttcggatcacttgaactttctccagttgatggccgcaca
ttgacagacttcatgcatttaaggggactgaagatgcgctctttgggtcgtgtggttgaa
ctgtcagagaatcttcctcatatacggtcactttgtatccatgaaatggttactcgagct
ttcaagcacttgcttgaagtagtcatttcccgtgttgacaaaataactgacttatctgcg
gcaatagcatcaaccttaaattttctactcagaggttctgtggtggaagatgacgccctc
agattgcaatggttacgattatttctatccaaaagatttggttggacactgaaagatgaa
tttccgcacttgaggaagttatcaattctccgaggactttgtcataaggttggtctagag
ttggccccaaaagattatgacatggatttccaaaaccctttcagcaaatacgacattatt
agcatggttccagtgtgtaagcatgtaacgtgctcttcagccgatgggcgaaatttgttg
gagtcatctaaaattgctcttgataaaggaaagctagaggacgctgttaattttggaaca
aaggcactagcaaagatgatagctgtttgcggtccttatcatcgagttacagcaagtgct
tacagccttgtagcagtagttctttaccacaccggtgatttcaatcaggcgaccatttat
cagcagaaggctctggctataaacgaaagggaacttgggcttgaccatccagataccatg
aaaagctatggggatctgtccgttttctattaccgtcttcaatacatcgaattggctttg
aagtacgtaaatcgtgctttgtttcttcttcattttacgtgtggtctatctcaccctaac
acagctgcaacatacattaatgtggctatgatggaagagggcatgggaaatgtccatgtt
gctctcagatacctgcacgaagctctcaagtgtaatcagagactgttaggagcagatcat
atacagactgctgcaagctatcatgccatagccatagctctctcattgatggaagcatat
tccctcagtgtgcagcatgagcaaacaacacttaagatacttcaggccaaacttggaccg
gatgatcttcgtactcaggacgcagttgcatggcttgaatattttgaatctaaatctctg
gagcagcaagaagcagcccgaaatggatttccgaagccagatgcgttaattgcaagcaaa
ggtcaccttagtgtatcagatctcctagatttcattactcctgatcaagattcgaaagta
aatgatgcacataggaagcagcgccgcacaaaggtacatcagtcgagtgataatatccct
ccggcacaccaaaatgcaatagcttatgatgacttgccaaatcatggcgtggagaacact
acaattttgatagatgataaaactgatgcagttgaggacagatccgttcatcaggacctg
gaggagaagggtgatatttctacaaaaggtttgtcagttacgagcataactgttgaagaa
acaacttcagatgaaggctggcaagaagctaattcgaagggtcggtctggaagtactgct
actggccggaagtttggtcgaagaaggccagagagtgaatattcaaattttagagaaagc
aaataccggagggatgtcatttctccaccacggacttcagctcctaagagttttccgagt
gatttgtattcaccaaagcagtcaaaggttcgtactctgagtgcaggagaagattcagtt
aaacttcagtccaaaatttctgtttctaaagtcccctctattccagcaactacgaatttg
gcttcgaaatctgtatcttacaaagaagtagctttggcacctccaggtacggttctaagg
tcactgcacgataaagttgaaagcttaagtgtggaaaatgctgaagccgagacatgcaat
actcccgctgagactttgaaaattgaggaaagcataggtaactctgcggttgaagtgatt
ccaaatgacggggaggaaggaacaggtcttgcaagtgcatcccaatcagaagatacaggc
cctgaaattgtagaggaaaggtcgggagaaaaaaatggaagtaagctttcagcagctgct
gaaccttacaatccaagaccactaacaactactcttcctctaaatccggttgctgttaca
agtctatacgatgtgagagacagtcaagtaatgctttcagcgccagtgcttcccccagta
gctgctagagttccttgtggtcctcggtcgtcactgtattacaaaaccaattattccttc
cgcttgagacaaggtgttcagaaatttcaaagatctgttacagaaagagggggttctggt
cctccaagaatcatgaacccgcatgctcctgagtttgttcccgggagaacttggcatgtg
gatactctagacgaatgtgcatatgttgcaactgaatcaaatccttcgcttgaagttagt
ggggctgcagaggaggaacgacaagaaatttccagtagcaaagctgaagatggtatcttg
agaaagagcatctccgattctgagaaatccgagcttgcaaggcagatgttgctcagcttc
atagtaaaatccgtgcagcagaacaaggatcctgcaaatgaaagtaagcaagggaatcaa
tcagatgccattgaagatgacagtgcgataataaaaattcactatggagatgaaggaaag
agggacttggtttctgaatccggtggctcggagcaaccaacagtaacggatgtaaagagt
aaggaagggggggacgctgaaggatttacacttgtgacgaacaggagaagaagccggcag
ctgagaagcggggtagcggggttgtacaatcagcaatctatctcggcttctgttcattga
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integrated database retrieval system
