Malus sylvestris (European crab apple): 126611663
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Entry
126611663 CDS
T09027
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
msyl03000
]
126611663
03036 Chromosome and associated proteins [BR:
msyl03036
]
126611663
Transcription factors [BR:
msyl03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
126611663
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
126611663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Nop14
Motif
Other DBs
NCBI-GeneID:
126611663
NCBI-ProteinID:
XP_050135994
LinkDB
All DBs
Position
17:complement(3390360..3395781)
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AA seq
643 aa
AA seq
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MTDGHLFNNISLGGRGGTNPGQLKIFSGGILWKKQGGGKAVEVDKADIVGVTWMKVPKTN
QLGVQIKDGLYYKFIGFRDQDVTSLTNYFQNTCGLTPAEKQLSVSGRNWGEVDLSGNMLT
FLVDSKQAFEVSLADVSQTQLQGKNDVILEFHVDDTTGANEKDSLMEISFHIPNSNTQFV
GDESHPPAQVFRDKISSMADVGSGGEDAVTTFDSIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTYVVVTLDPPIRKGQTLYPHIVLQFETDLVYQTDLAMS
EELLNTKYKDKLELSYKGLMHEVFTTILRGLSGAKVTKPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHDQIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQ
RNEYHNLFDFISSKGLKIMNLGEGQAANGGVAPLLDDADDDAVDPHLVRVKNEAGDDESD
EEDEDFVIDKDDGGSPTDDSGEDDSDASESGGEKEKPAKKESRKEPSTSKVPSSKKQKTK
DAGEDGSKKKKQKKKKDPNAPKRAMSGFMFFSNTERENVRRENPGIAFTAVGRALGEKWK
KMSADEKEPYEAKARQDKERYKDEINGYKNPQPMNIDSGNESD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccacctcttcaacaacatctccctcggaggccgcggcggcacgaatcca
gggcagcttaaaatattttcaggaggaattttatggaaaaaacagggaggtggtaaagca
gtcgaggttgataaagctgacattgttggggtaacatggatgaaggtcccaaagactaac
caacttggtgttcagattaaagacgggttatactacaagttcattggatttcgtgaccag
gacgtcactagtttgaccaattattttcaaaatacatgtgggttaacaccggcggagaag
caactttctgtaagcggacgtaattggggagaagtggatttaagtgggaatatgctgact
ttcttggttgactccaagcaagcatttgaggtatctttggctgatgtctcacaaacacaa
cttcagggaaaaaatgatgtcatcttagagttccatgtggatgataccacaggagctaat
gagaaagattcattgatggaaataagctttcatatacctaactccaacactcaatttgtt
ggtgacgagagtcatcctcctgctcaggttttccgtgacaaaatctcgtcgatggcagat
gttggttctggaggtgaagatgctgttaccacatttgatagcattgcaatcctcacacca
aggggtcgctacagcgtggaacttcatctttcattcttgcggctacaaggacaggctaat
gatttcaaaattcagtacagcagtgttgttcggctgtttctacttccgaagtctaaccag
cctcatacctatgttgttgttactcttgatcctcctatccgtaaagggcaaacattgtac
ccacatattgttttgcagtttgaaactgacctcgtgtatcaaaccgacctggcaatgagt
gaagaacttttgaacacgaagtacaaggacaagttagaactatcttataagggactaatg
catgaagtgttcaccacaatactgcgtggcttgtctggtgccaaagttacgaaaccggga
aaattccgcagctgtcaagatggttatgctgtcaaatcttcattgaaagctgaagatggt
gttctatatcctctggagaagagcttcttttttctaccaaaacctcccacccttattctt
catgatcagattgactatgtggaatttgagaggcatggcgctggaggctcaaatatgcac
tattttgaccttctcatccgactcaaaagtgagcaagaacacctgttccgaaacattcag
aggaatgaatatcataatctttttgacttcatcagttcaaagggtctcaaaatcatgaac
ttaggagaaggccaagcagcaaatggtggtgtggctcctcttcttgatgacgcagatgat
gatgctgttgacccgcatcttgtccgtgtgaagaatgaagctggtgatgatgagagtgac
gaagaggatgaagattttgttattgacaaggatgatggaggttctcctactgatgactcc
ggggaggatgattctgatgctagtgaaagcggaggtgaaaaagagaagcctgcgaaaaag
gagtctcgtaaggaaccttcaacttccaaggtaccatcttccaagaaacaaaaaaccaaa
gatgcaggtgaagatggttcaaagaagaaaaaacagaagaagaaaaaggatccaaatgca
ccgaaaagagcgatgtctggtttcatgttcttctcaaatacggagagagagaatgtaagg
agagagaaccctggaattgcgtttaccgctgtggggagagcacttggagagaagtggaaa
aagatgtcggctgatgaaaaggagccatatgaagcaaaggctcgtcaagataaagaacgc
tacaaggatgaaattaacggctacaagaacccccaacccatgaacatagattcggggaac
gaatctgattga
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