Malus sylvestris (European crab apple): 126611682
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Entry
126611682 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126611682 isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126611682
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
msyl01002
]
126611682
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
msyl04121
]
126611682
03036 Chromosome and associated proteins [BR:
msyl03036
]
126611682
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126611682
Peptidases and inhibitors [BR:
msyl01002
]
Metallo peptidases
Family M67
126611682
Ubiquitin system [BR:
msyl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126611682
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126611682
BRISC complex
126611682
Chromosome and associated proteins [BR:
msyl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
126611682
DNA repair and recombination proteins [BR:
msyl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
126611682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
126611682
NCBI-ProteinID:
XP_050136013
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All DBs
Position
17:24668247..24675962
Genome browser
AA seq
435 aa
AA seq
DB search
MSLASVKMSEDVWLTCLTHALSTETEEIMGLLLGDIENSVNGSVTALIWGASPQTRSDRR
KDRVETNPEQLAAASAQAERMTLSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLLD
SGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQHHMSRPISLSPIHKSPVIEVESSLSTS
ENVPARSTLTRAGSPEQDTADSRTSGTIKGGGRSSDLGLLFANADASHLGRVGGNYQTDT
SSNIIGDIDPMDMSESMQEAMHRSNLDMSGAEYVRKEVPLHVLPTSSLVKLDSPLMSFTE
LQRVLYEEEQAAYNQAILQNMRDGKVHPLTFIHHTSMYQSSMCKLIEYCLSPAISALQCR
LRENETRLAVLTDEVKNLETEMHRTSESNSGSPRPVSSPVLRGSAPLGHRDLFHPTESVS
ARSLAGSGSRSRKGS
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcgtctgtgaaaatgtcggaggacgtgtggctgacgtgcctcactcacgca
ttgtccaccgagacggaggagatcatgggcctcctgcttggtgacattgagaactccgta
aatggcagtgtgacagcactaatttggggagcatcacctcagacacgatctgatcggagg
aaggatcgtgtggagactaatcctgagcagttggctgctgcatcagcccaggccgagaga
atgacactgtcaactggaagaacaactagagtgattgggtggtaccattcacatcctcat
attacagttctcccatctcatgttgacgtgcggacgcaggcaatgtatcaacttctagat
tctgggtttattgggctcatattttcctgttttagtgaagatataaacaaggttgggcga
atccaagtcattgcatttcagtcctcagatgggaagcagcatcacatgtcaagacccata
tctttatctcctatacataaaagtccggttatagaagttgaatcgtctttaagtacctca
gaaaatgtaccagcgagatccaccttaactagagcagggagtcctgaacaagacacagct
gattcaagaacttctggaactataaagggtgggggaaggtcctcagacctagggcttctc
tttgctaatgcagatgcaagtcatctaggaagagttggaggaaactaccagactgacaca
tcaagcaacatcattggcgatatagatcccatggatatgtcagagagtatgcaagaagca
atgcaccgttctaacttggatatgagtggtgccgagtatgtcaggaaagaagttcctctt
catgttttaccgacctcatctcttgttaagctcgattcacctttaatgtcattcacagaa
ttgcaacgagtactgtatgaagaggagcaagcggcttataaccaagcaatcttgcaaaat
atgagggatgggaaagtgcatccacttactttcatacaccatacatcaatgtaccagtct
tccatgtgcaaattaatcgaatattgtttgagtcctgccataagtgcactgcaatgtcgg
ttaagagagaatgaaactcggttagcagtgctcaccgatgaagtgaagaatttggaaacc
gagatgcatagaacaagcgagtcaaactcaggatctcctcgtccagtttcatcgcctgta
ctccgtggaagtgctccgttggggcacagggacttgtttcatccaactgaatctgtcagt
gcaaggagtctggctggttctggcagtcggagccgaaaaggttcataa
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