Malus sylvestris (European crab apple): 126612087
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Entry
126612087 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126612087
KO
K04485
DNA repair protein RadA/Sms
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
msyl03400
]
126612087
DNA repair and recombination proteins [BR:
msyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
126612087
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
DnaB_C
Zn_ribbon_LapB
AAA
Lon_C
AAA_22
NACHT
AAA_16
AAA_19
AAA_14
AAA_24
KTI12
AAA_5
NTPase_1
nSTAND3
Isochorismatase
AAA_18
zf-Tbcl_FmdE
SLFN-g3_helicase
AAA_29
Motif
Other DBs
NCBI-GeneID:
126612087
NCBI-ProteinID:
XP_050136347
LinkDB
All DBs
Position
17:20652840..20667940
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AA seq
740 aa
AA seq
DB search
MDPFEPLNPRVLGLNLPKQFQSFLLRGLFAFQLKSCKIDPSLHTEFSSTFNSLMPVASDM
RALRAISTHKHLLKPTLSIPSLASFQSLQNPNFSRHFHSTSRLHHAEEPGSAADSLQTHN
SSSSKGETRRGWSVFRPVTHTLATQRVPNTSGDGQELRGENESETQLGLSSLGNGFDEIE
KDRVQRSGKSETQLGLSNFGYGFDEIERDEAHRSAKSEARMGLSNLRSEVGGFERDEAVR
SVKNVNAGTKLFGGIVRSKKKGKVKTSWVCSNCGESFGQWWGECRSCNEMGTLKQFSETS
DDGKVSGFEVSEKVVRSWMPLEASEVGPTRLTDVNRGINWTERRIPLPGLFGSEVARVLG
GGVVQGSLILIGGDPGVGKSTLVLQMASLIAEGQGLGKAASVVYVSGEESVEQIGSRADR
MKIETEDLFLYSSTDIEDILEKIQPLNPRALIIDSIQTVYLKGVAGSAGAIQQVKECTSA
LLRFAKKTNVPVLLIGHVTKSGDIAGPRVLEHIVDVVLYMEGEENLSHRLLRSVKNRYGS
TDELGVFEMTQSGLQALSNPSEMFLSEKYSDSPCLAGLAVAVIMDGSRTFLIEIQALCVS
ESTVLRQVNGVSASRADMIKSVLTKQAGLKLQENAIFLNVVSGVTLKETAGDLAIAVAIC
SSFLEFPIPNSIAFIGEIGLAGELRPVTRMDKRIHTVAKLGYKMCIVPKSSETYQGTPGL
EDIEIIGCKDLKEVISNVFK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacccttttgaaccattaaacccaagggttttggggttaaacctgcccaaacaattc
cagtcttttctacttcgcgggttgtttgcatttcaactcaaaagctgcaaaatcgaccct
tcactgcatacagagttctcttctaccttcaactctttgatgccagtagcatcagacatg
agagctctccgagcaatctccacccacaaacacctcctcaaacccaccctctccatacct
tccctcgcctccttccaatccctccaaaaccctaacttttcccgccatttccactccaca
agccgtctccaccatgccgaagagccgggctccgccgccgattccctgcaaacgcacaac
agttcgagctccaagggagaaacccgtcgcggttggtctgtctttcgtcctgtcacgcac
acattggcgactcaaagggtcccgaataccagcggcgatggacaagaactaagaggcgaa
aatgaaagcgaaacccaattgggtttatcgagtttgggaaatgggttcgacgagattgag
aaagatagggttcagaggagtggtaaaagtgaaacccaattgggtttatcaaattttgga
tatgggttcgatgagattgagagagatgaagctcataggagtgctaaaagtgaagcccgt
atgggtttatcgaatttacgaagtgaggttggcgggtttgagagagatgaggctgttagg
agtgttaagaatgtgaatgcagggactaagctttttgggggaatagtaaggagtaagaag
aaggggaaggtcaaaactagctgggtttgctcgaattgtggggagtcatttgggcagtgg
tggggtgaatgccggtcttgtaatgaaatgggcacattgaagcagttttcggagacaagc
gatgatggtaaggttagtgggtttgaggtttcagagaaggtggtgcggtcgtggatgccg
ctggaggcaagcgaggttgggccaacgcggttgacagatgtgaaccgggggattaattgg
acagaaaggcggattcctttgcctggactctttggaagtgaagttgcaagggtgcttggt
ggtggtgttgtgcaaggttcattaattttgattggcggtgatccaggagtcggcaagagt
acactcgtgttgcagatggcttcactaatagctgaagggcaagggcttggtaaagcggcc
tctgttgtgtatgtctcaggtgaagagagtgttgagcaaattggaagcagagctgaccgt
atgaagattgaaacagaggatcttttcttgtactcaagtaccgatattgaggatatatta
gaaaaaattcaacctctcaaccctcgggctttaatcattgattcgattcaaacagtttat
ttaaaaggagttgctggaagtgctggagcgatccaacaggtgaaggaatgcacatcagcc
ttgctgcgttttgcaaagaagactaacgtccctgttctcttgattgggcacgtaacaaaa
tctggagatattgctggacctcgtgtcttggagcatattgttgatgttgtactatatatg
gaaggggaggagaacttatcccatcgtttacttcgatctgtgaagaatcgctatggatcc
actgatgagcttggagtatttgaaatgacacaatcaggactgcaagctctttcaaacccc
agtgagatgtttctatctgagaaatactcagattcaccttgtttagctggtttagctgtt
gctgtaataatggatggatctcgaacgtttctcattgagattcaggcattgtgtgtatct
gagtcaacagttttacggcaagttaatggggtttcggcaagtagagctgacatgattaaa
tctgtactaacgaagcaagctggtctaaagctccaggagaatgccatcttcttaaatgtt
gtcagtggggtgacgctgaaagaaactgctggagatcttgcaatagcagtagcaatttgc
agcagtttcttggagttccctattcccaatagtattgcattcattggtgaaattggactt
gctggtgagcttcggccggtcactcgaatggataaaaggatacacacagtggcgaaactg
ggctacaagatgtgtatcgttccaaaatcatccgagacatatcaaggaactccaggttta
gaggacattgaaattattggctgcaaggatctgaaggaggtcatcagcaatgtgttcaaa
tga
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