Malus sylvestris (European crab apple): 126612212
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Entry
126612212 CDS
T09027
Name
(RefSeq) pumilio homolog 5-like isoform X1
KO
K17943
pumilio RNA-binding family
Organism
msyl
Malus sylvestris (European crab apple)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NABP
DUF6922
DUF445
Motif
Other DBs
NCBI-GeneID:
126612212
NCBI-ProteinID:
XP_050136524
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Position
17:complement(15757860..15766004)
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AA seq
1018 aa
AA seq
DB search
MATEGLMRMVESSREMKWPPSKDSATFGSPLRSMTAEESGFISKGHGFKRDRAELIPNRS
GSAPPSMEGSFSAIENLLCQQNSSMKTSLTNLNNVVDSVENEENLSSDPARLAYYLSNMN
LNARPPPPLIVRENHHLVRHSGGLGTKWRSISLDDSASGSLHLSQGSLSTLQEDPNDASS
SRKSQDNLAEDSVAVMPVKDTASLASYNKSLVDLIQVGVKQDFPRTPSPVYNHSLSSSLG
TTDELIDSDAHSLSPNASSLDKSKLPEPNSNSINDCPDTSASYTLALGIIPNDVPLPTSS
PSAQQCQPDDGTGNLQKDESNIGHDGSRNNASINGDLGLDISSARASKVDTNNNKQQELS
YGRYVPQHNLSTQQGVPYQLQGFQAQLVSQGMNYLQSGMQNLPYSYPKFSSIETQPSLHS
PGVTPALYSTPTPYMTSGSPFYPNYQSSGVFPPQYSMGGYTLGSTFLPSYMPGYTSHGSF
SMPFDASLGPRFSGQTVDVSRGERIPHEGDMQHHSRFYGQHGPMLQPPFVDPLYTQYYAR
SLEDSYGASIQYGYLSSRGQLSQQELNANAYTDGPKFHSSTNGNQGIPSPRNLGINGSGY
YGLPSGMGVMTQFPASPLGSPILPSSPMGRTNHFGRKYELRTPQGSVSGVYSGWQGLRNS
ILDDPRRHSLLEELKSSNPHKFELSDIAERIVDFSVDQHGSRFIQQKLEYSSAEDKVSVF
KEILPNASKLMTDVFGNYVIQKFFEYGTPEQKKELADQLAGQMLPLSLQMYGCRVIQKAL
EVIELDQKIQLVHELDGHVMICVRDQNGNHVIQKCIECIPTEKIGFIISAFQGQVATLST
HPYGCRVIQRVLEHCSDDLQSQCIVDEILESAYDLAQDQYGNYVTQHVLERGKPNERSQI
ISKLVGKIVQLSQHKYASNVVEKGLEYGDTAERELLIEEIIGQMEENDSLLAMMKDQFAN
YVVQKVLETSNGRQREILLKLIRVHIDALKKYTYGKHIVVRFQQLSGEEVQTSEAGGV
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgagggtctcatgagaatggtagaaagcagcagggaaatgaagtggccccca
tctaaggattctgcaacatttggatctccactgagaagtatgacagcagaggagtcgggc
ttcatttcgaaggggcatggctttaagagagatagagctgaacttatacctaatagaagt
ggcagtgctccaccaagtatggaaggttccttttccgctattgaaaacctgttatgtcaa
cagaactccagcatgaaaacaagcttgactaatctaaacaatgttgtggatagtgttgag
aatgaagaaaatctgagttcagacccagctcgtttggcatactatttatcgaatatgaac
ttgaatgcaaggccacctccaccacttatagtaagggagaatcatcacctggtccgccat
agtggtggtctaggaaccaaatggagatcgatttctttagatgacagcgccagtgggtcc
ttacatctttcccaaggttctctttctactcttcaggaggaccctaatgatgcgagttca
tccagaaaatctcaagataacttggcagaagatagtgttgcagtaatgcctgtcaaggac
acggcttctttggcaagttataataagagtttagtggatctcatacaggtaggagttaaa
caagacttcccccggactccatctcctgtatataatcactctctctcatcaagtcttgga
acaacagatgaactaattgatagtgatgcacattcgctttcaccaaatgcttcttctctc
gacaagtcaaaattaccagaaccaaattcaaactctatcaatgattgtccagatacaagt
gcctcgtacacgcttgctcttgggatcataccaaatgatgttcctttgcctacctcctcc
ccaagtgctcaacaatgtcaacctgatgatggtacagggaacctacagaaagatgaatct
aatattgggcatgatgggtcgaggaacaatgcatcgattaatggtgacctagggttggat
atttccagtgcgagagcatctaaagttgacaccaacaataacaagcaacaagaactatct
tatgggaggtatgtaccacaacacaatttgtctacacaacaaggtgttccatatcaacta
caggggttccaggcacaattagtttcccaaggaatgaattatttgcaaagtggaatgcaa
aatcttccctacagctacccaaaattctcttctattgagacacaaccatcattgcactca
cctggagtcacacctgccttgtatagtacaccaacaccatatatgacttcagggagtcca
ttctacccgaattatcaatcatctggtgtatttcctccacaatatagtatgggcggatat
actttaggttctacttttcttccttcatatatgcctgggtacacttctcatggttccttt
tcaatgccttttgatgcttctttggggccaagatttagtggtcaaactgttgatgtttca
agaggggagagaattccccatgaaggtgatatgcaacaccatagtagattctatgggcaa
catgggccaatgctccagccaccttttgtggatcccctttatacgcagtactatgctcgt
tctttggaggattcatatggtgcttcaattcaatatggttacttgtcatcaaggggtcaa
ctttcgcaacaagaattaaatgctaatgcttatacggatggcccaaaattccactcttca
actaatggtaatcagggtattccaagtccaagaaatttgggaatcaatggtagtggttat
tacggacttccttctggcatgggtgtaatgacacagtttcctgcctcacctcttggtagt
ccaatattgccatcatctccaatgggcagaacgaatcattttggtcggaaatatgaattg
aggactcctcaaggttctgttagtggagtatattctgggtggcaagggctgagaaactcc
atcttggatgatcctagaagacattctttacttgaagaactgaaatctagtaatcctcat
aaatttgaactttccgatatagctgagcgcattgttgatttcagtgtcgatcaacatggg
agtcgatttattcaacagaagctagaatacagcagtgctgaagacaaggtatctgttttc
aaagagattcttccaaatgcttcaaaattaatgacggatgtatttggaaattatgttatt
caaaagttttttgaatatgggactcctgagcagaaaaaggagcttgcagatcaacttgct
gggcaaatgttgcctttaagtttgcagatgtatggttgtcgtgtaatccagaaggctctc
gaagttattgagcttgaccagaaaatacaacttgtgcatgagcttgatggacatgttatg
atatgtgtacgagatcaaaatggaaatcatgtaatacagaagtgtatagaatgcattccc
acagagaaaattggatttatcatttctgcttttcaaggacaagttgccacactttctact
catccctatggctgtcgtgtcatacagagagttttggagcattgttcggatgaccttcaa
agtcaatgtatagttgatgagatcttggaatctgcttatgatcttgctcaagatcagtat
ggcaattatgttacccagcatgttctggaacggggaaagcccaacgaaagaagccaaatt
atcagcaagttggttgggaagattgtacaattgagtcagcataaatatgcatcaaatgtt
gttgagaagggtctggagtatggtgatactgctgagcgggagctcttgattgaggaaatc
attggacaaatggaagaaaacgatagcctattggcaatgatgaaggaccaatttgccaat
tatgtggttcagaaggttcttgaaacaagcaatggtagacagcgggaaatactgctcaaa
cttataagagttcatattgatgctctgaagaaatatacttatgggaaacacatagttgtt
cgttttcaacagctatccggtgaagaggtccaaacctcagaagctgggggggtgtag
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