Malus sylvestris (European crab apple): 126612371
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Entry
126612371 CDS
T09027
Name
(RefSeq) uncharacterized protein LOC126612371
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl00260
Glycine, serine and threonine metabolism
msyl00400
Phenylalanine, tyrosine and tryptophan biosynthesis
msyl01100
Metabolic pathways
msyl01110
Biosynthesis of secondary metabolites
msyl01230
Biosynthesis of amino acids
Module
msyl_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
126612371
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
126612371
Enzymes [BR:
msyl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
126612371
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Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
126612371
NCBI-ProteinID:
XP_050136732
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Position
17:5774710..5778212
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AA seq
502 aa
AA seq
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MATQSLFTANSLHTKPSSSPHAKVEKKWHGFIALDRKPMHLRLSNGCRARASLNADSKSI
EIPRQWYNLIADLPVKPPPPLHPKTFEPIKPEDLSPLFPDELIKQEASNERFIDIPDEVR
DVYKLWRPSPLIRAKRLEKLLDTPARIYYKYEGVSPAGSHKPNSAVPQVWYNAQEGIKKV
VTETGAGQWGSALAFACTLFDVECEVWQVHASFDQKPYRRLMMQTWGAKVYPSPSTLTEA
GRKILQMDPSSPGSLGIAISEAVEIAAMNGDTKYCLGSVLNHVLLHQTVIGEECLKQMEV
IGEVPDVIIGCTGGGSNFAGLSFPFIREKLKGKMNPVIRAVEPAACPSLTKGVYAYDYGD
TAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMSPLISHVYELGYMEAISIPQIECFQGAI
KFARTEGLIPAPEPTHAIAATIREAQKCRETGEAKVILTAMCGHGHFDLPAYENYLRGNL
VDLSFEEEKIQASLASVPKVGG
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggccactcaaagtctcttcactgcaaattcacttcacactaaaccttcatcatcccca
cacgctaaagttgagaagaaatggcatggatttattgcacttgatagaaagcctatgcat
ctgaggctttcaaatggctgtagagcaagagcatctctcaatgccgattcaaagtcaatt
gaaatccctcgacagtggtataacttgattgcagaccttcctgtaaaaccacctcctcca
ttgcatcccaagacttttgaaccgattaaacctgaagatttgtctcctctatttcccgat
gagttgattaagcaggaggcaagcaacgaaagattcatagatatcccagatgaggttcgt
gatgtatacaagctttggcgcccatcacctctcattagggccaagaggttggagaagctt
cttgacacacctgccagaatttactacaagtatgaaggtgtcagcccggctggatcacac
aagcccaactctgcagttccacaagtgtggtataatgcacaagaaggaatcaagaaggtc
gtgacagaaacgggagctggccaatggggaagtgcattggcttttgcttgcaccttattt
gatgttgagtgtgaggtgtggcaagtgcatgcatcttttgatcagaaaccatatcgcaga
ttgatgatgcaaacttggggtgcaaaggtatacccatctccatccaccctaaccgaagca
ggtagaaaaatccttcaaatggatccatccagccctggaagtttgggaatagctatttct
gaagccgtggagattgcagctatgaatggtgatactaaatactgtctaggaagtgttctc
aaccatgttttgcttcaccagacagtaataggagaggagtgtctaaaacaaatggaggtg
ataggtgaagtaccggatgttatcataggatgtactggtggaggatccaattttgcaggg
ctcagtttcccattcatcagggagaagctgaaagggaaaatgaaccctgtaattagagca
gttgaacctgcagcatgtccttcgttaactaaaggggtatacgcatatgattatggcgat
acagcggggctgactccactaatgaagatgcatacgcttgggcacgacttcatccctgac
ccaattcatgctggaggattgcgctaccatggtatgtcaccgttaatttcacacgtctac
gaactgggttacatggaagcaatttcaattccccagattgagtgctttcaaggtgctata
aaatttgctagaaccgaaggattgataccagcgccagagccaacacatgccatagctgcc
accatcagggaagctcagaaatgtcgagagaccggagaagccaaagtgattctcacagca
atgtgtgggcatggacattttgatttgccagcttatgagaattatctgcgaggaaatctg
gtggatttgtcatttgaagaggagaagattcaagcatcattggctagtgttcctaaagta
ggtggctga
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