Malus sylvestris (European crab apple): 126612439
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Entry
126612439 CDS
T09027
Name
(RefSeq) UPF0400 protein C337.03-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126612439
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126612439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
Prenyltrans
CTK3
UTP20_C
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
126612439
NCBI-ProteinID:
XP_050136799
LinkDB
All DBs
Position
17:complement(472435..477976)
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AA seq
518 aa
AA seq
DB search
MGSAFNPQILVEKLAKLNSSQASIETLSHWCIFHMNKARQVVETWARQFHCAPRDQRLAF
LYLANDILQNSRRKGSEFVGEFWKVLPDALRDVIKSGDEFGRNAAQRLVNIWDDRKVFGS
HGQILKQEFVGQNPEISNRNGKHSGARLHPAGTALDKIVSDYQASHGQMDEDTILSKCRS
AISCLERVDKEIGADFSSGQFHGSAFLEEVQGQNAILRNCIEQLRAVESSRANLVSHLRE
ALQEQEYKLDQVRNQLQDAESQSELATNICHRLMNGDNAQQIAVQSSKEAHTSVAPSSFM
VGREQSAPVMYTQQVAFAEKSSHGEEDSRKSAAAAVAAKLTASTSSAQVLSYVLSSLASE
GVISNPINESSGDYPSEKRLKLEHDQSSSYLPRSPNPSASPPFSHSESHPHNVPTTNQQY
TPTPSEAPPPPSSSPPPLPPLPPQPQYQVPQYVPSPGQYTYNVAQQQPPPMPSYQAGAPV
NGVSPFMTAANSYQSFQGSDGKLYNQQSPVQMTPISRQ
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgcgttcaatccgcagattttagtggaaaagctagccaagctcaatagttcg
caagcaagcatagagactttatcacattggtgcattttccatatgaataaagcaagacaa
gttgttgaaacatgggctaggcaatttcattgtgctccacgcgaccagagattggctttc
ttgtatcttgcaaatgatattttacagaacagtaggcgaaaaggttcagaatttgttggt
gaattttggaaggttcttccagatgctcttcgtgatgtaattaaaagtggagatgaattt
ggaagaaatgcagcacaacgattggttaatatatgggatgatagaaaagtttttggttca
cacggccagattctcaagcaagagtttgttggacagaacccggaaattagtaacagaaat
gggaagcattcgggtgccagattgcatcctgctggaactgcgttggacaaaatagtttca
gattaccaagctagtcatggccagatggatgaggacactatattgagcaaatgcaggagt
gctattagctgtctagagagggttgataaggaaattggtgccgatttcagctcagggcaa
tttcatgggtctgcatttttggaggaggttcagggtcagaatgctatactaaggaattgt
attgaacaactaagagctgttgaatcatcaagagctaatcttgtgtctcatctaagagag
gctcttcaggagcaggagtacaagctagatcaagtccgaaaccaacttcaggatgcagag
tcccagtcagagctggccactaatatctgccatcggttaatgaatggcgacaatgcacaa
cagattgcagtccagagctcaaaggaagctcatacctctgtagcaccttccagctttatg
gtaggaagagaacaatcagctccagtaatgtacacacagcaggttgcttttgctgaaaaa
tccagtcacggggaggaagattcgcgcaagtctgcagctgctgcagtggcagcaaagctg
accgcatcaacatcctcggcccaggtgctctcttatgtcctctcctctctggcatccgag
ggtgtcatcagcaatcccattaacgagtcttctggtgattatccatccgaaaagaggctt
aagctggagcatgaccaatcgtcgtcctatttaccccggagccctaacccgtctgcctct
cctccgttctcgcattctgaatctcacccgcacaatgtccctaccaccaaccaacaatac
actcccactcccagtgaggcaccacctcccccatcatcttctcctccaccacttccacca
ttaccaccccaaccacagtaccaagtgccccaatatgtgccgtctcctggacaatacacc
tacaacgtggcccaacaacagccacccccaatgcctagttatcaagcaggagctccagta
aatggcgtttctcccttcatgacagcggccaattcttatcagagttttcaaggttcagat
ggtaaactctacaaccagcaatcaccggtgcaaatgacgccgatttcgaggcaataa
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