Malus sylvestris (European crab apple): 126612509
Help
Entry
126612509 CDS
T09027
Name
(RefSeq) transcription elongation factor SPT4 homolog 1-like
KO
K15171
transcription elongation factor SPT4
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126612509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
msyl03021
]
126612509
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126612509
Transcription machinery [BR:
msyl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
126612509
RNA polymerase I system
126612509
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
126612509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
126612509
NCBI-ProteinID:
XP_050136894
LinkDB
All DBs
Position
17:complement(32610687..32612369)
Genome browser
AA seq
119 aa
AA seq
DB search
MRNAQPEPAQIPTSFGHELRACLRCRLVKTYDQFREHGCENCPFFDMNDDNERIVDCTTP
NFNGIISVMDPSRSWAARWLRIAKFVPGCYTLAVSETLSEDMKNMCEDAQMQYVPPKRV
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgcgcaaccggaaccggcccagattccgacgagcttcggccacgagcttagg
gcttgcctccgttgccgcctcgtcaagacctacgatcagttcagagaacatggatgcgag
aactgccctttcttcgacatgaacgacgacaacgagcgcatcgtcgattgcaccactcct
aacttcaacgggatcatctcggtaatggatccgagtaggagttgggctgcgaggtggctc
cgaattgcaaaatttgttcctggttgttacacgcttgctgtttcggagactcttagcgag
gacatgaagaacatgtgcgaagatgctcagatgcaatacgtgccgccaaagcgtgtatga
DBGET
integrated database retrieval system
