Malus sylvestris (European crab apple): 126612627
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Entry
126612627 CDS
T09027
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
msyl
Malus sylvestris (European crab apple)
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
msyl01003
]
126612627
Enzymes [BR:
msyl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
126612627
Glycosyltransferases [BR:
msyl01003
]
Polysaccharide
Structural polysaccharide
126612627
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
126612627
NCBI-ProteinID:
XP_050137048
LinkDB
All DBs
Position
17:5346333..5349898
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AA seq
503 aa
AA seq
DB search
MCKGEDFEKCDYRETMKVGFKLMGRVERLKSSVLKVNSWLLIIRAIVTALVWASAVQLVG
IWLIRGPSLFNVWPPCTHLELPAHAVELTNKLPMPIALPPKRVYKNNGYLMVSCNGGLNQ
MRAAICDMVAVARYLNVTLIVPELDKNSFWAASEFQDVFDVDHFIASLRDEVRILRILPP
KLKKRPAYSLPPVSWSNMSYYLHQILPLVQKYKVVHLNKTDARVANNGLPLEFQKLRCRV
NFHALRFTSQIEEVGRKLVGILREKGPFLALHLRYEMDMLAFSGCSHGCSNDEVEELTRM
RYANPLWKIKDINSETKRLEGLCPLTPEETALVLVALGVDHNVQIYIAAGEMYGGNRRME
GLKAAFPNLVRKETLLEPSDLRFFPNHSSQMAALDYLVSLESDIFIPTYDGNMAKVVEGH
RRFLGFKKTVLLDRRLLIGLIEQFSTGSLSWDEFSYIVKEAHANRMGSPKERVSVPDKPK
EEDYFYSNPHECLQLLDGPLRTT
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaaaggtgaggactttgagaagtgtgattacagagaaacaatgaaggtgggattt
aagttgatggggagagttgaaaggttgaaaagctcagtgttgaaggtgaactcatggctg
ctgatcatccgggcgatcgtgacggcgttggtgtgggcgtcggcagtgcagctggttggg
atttggttgattagggggcctagtttgttcaatgtttggcctccttgcactcacttggaa
ttgcctgctcatgctgtagaattgactaataagcttccaatgccaattgctctccctcca
aaaagggtttacaaaaataatggctatctcatggtttcttgcaatggaggactgaatcaa
atgcgagcggcaatctgtgatatggttgcagttgccagatacttgaatgtcacccttata
gttcctgagctggataaaaactccttttgggctgcgagtgagtttcaggacgttttcgat
gttgatcatttcattgcatcgttgagagacgaggttcggatattgaggatattgccacca
aagctgaagaaaagacctgcatactcgttgccaccagttagttggtctaacatgtcctac
taccttcatcagatcctgcctctggtgcagaagtataaagtagtacatttgaataaaacc
gatgctcgagtagctaacaatgggctacctctggagttccagaagctgcgctgcagagtt
aatttccatgctctgagattcacttcccagatagaggaagtcggtagaaagcttgtcgga
attttgagagaaaaaggcccttttctggctcttcatctccgatacgaaatggatatgtta
gcattctctggctgcagtcatgggtgcagcaatgatgaggtagaagaactcacaagaatg
agatatgctaatcccttgtggaagataaaggacataaattctgaaacaaagaggctagaa
ggtttgtgcccactaacaccagaggaaactgctctagtattggttgcactcggtgttgat
cacaatgtccagatttatattgccgctggagaaatgtatggtggaaacagaaggatggaa
ggtttgaaagctgcttttccgaatttggtcagaaaagagacgctgctggagccttcggat
ttgaggttcttcccgaaccactcttcccaaatggcagcattggactatctagtctcccta
gagagtgacatatttattcctacatacgatggaaacatggctaaagttgtcgaaggccat
cgcagattcttaggtttcaaaaagacagttttattggacagaaggctactgattggatta
atagaacaattcagcactggctcattgagctgggatgagttctcctacattgtgaaggaa
gctcacgccaaccgaatggggagcccgaaggagcgagtttcagtcccagataaaccgaag
gaggaagattacttctactcaaatccacatgaatgtttgcaactgttagatggacccttg
agaaccacatga
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